HHsearch alignment for GI: 254780751 and conserved domain: PRK06299
>PRK06299 rpsA 30S ribosomal protein S1; Reviewed.
Probab=97.37 E-value=0.00024 Score=49.24 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=22.1
Q ss_pred CCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCC
Q ss_conf 4287879899783638823135327897713022213712
Q gi|254780751|r 38 IKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPD 77 (723)
Q Consensus 38 ~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~ 77 (723)
T Consensus 190 ~~G~vv~G~V~~i~~--~GaFVdlg-gvdGllhiseiSw~ 226 (556)
T PRK06299 190 EEGQVVEGVVKNITD--YGAFVDLG-GVDGLLHITDISWK 226 (556)
T ss_pred CCCCEEEEEEEEEEC--CCEEEEEC-CEEEEEEHHHCCCC
T ss_conf 479727899999705--75899958-95899985671556