HHsearch alignment for GI: 254780751 and conserved domain: PRK06676
>PRK06676 rpsA 30S ribosomal protein S1; Reviewed.
Probab=96.24 E-value=0.011 Score=37.68 Aligned_cols=39 Identities=31% Similarity=0.437 Sum_probs=33.5
Q ss_pred CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCC
Q ss_conf 042878798997836388231353278977130222137121
Q gi|254780751|r 37 QIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDY 78 (723)
Q Consensus 37 ~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y 78 (723)
T Consensus 103 ~~~g~~v~g~V~~~~kg--G~~V~~~-gv~gFlP~S~ls~~~ 141 (390)
T PRK06676 103 FEEGEVVEVKVTEVVKG--GLVVDVG-GVRGFIPASLISTRF 141 (390)
T ss_pred HHCCCEEEEEEEEEECC--CEEEEEC-CCEEEEEHHHCCCCC
T ss_conf 53797799999999558--5999976-816877548725644