HHsearch alignment for GI: 254780751 and conserved domain: PRK11712
>PRK11712 ribonuclease G; Provisional.
Probab=100.00 E-value=0 Score=1157.64 Aligned_cols=487 Identities=32% Similarity=0.521 Sum_probs=467.5
Q ss_pred CCCEEEEECCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCC
Q ss_conf 98526896528960799999899899999607334604287879899783638823135327897713022213712102
Q gi|254780751|r 1 MANKMLIDASHVEETRVVVLRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQ 80 (723)
Q Consensus 1 M~k~~lI~~~~~~e~Rvav~e~g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~ 80 (723)
T Consensus 1 M~~eilIn~~-~~E~RvAlle~g~L~el~iE~~~~~~~vGnIY~G~V~~V~pgl~AAFVdiG~~k~gFL~~~di~~~~~~ 79 (489)
T PRK11712 1 MTAELLVNVT-PSETRVALIEGGILQEIHIEREAKRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIVPHTEC 79 (489)
T ss_pred CCCEEEEECC-CCEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEHHHCCCCHHC
T ss_conf 9856999789-983699999999999999855888776676699999430688776999847987428785543852111
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89889999999888631111100000001112233444334454222233445543322223432112211121100001
Q gi|254780751|r 81 IPFSDRQALLKESNIAQTDSEAVADDVTHGDVTIPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDV 160 (723)
Q Consensus 81 ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (723)
T Consensus 80 ~~----------------------------------------------------------------------------~~ 83 (489)
T PRK11712 80 VA----------------------------------------------------------------------------GE 83 (489)
T ss_pred CC----------------------------------------------------------------------------CC
T ss_conf 33----------------------------------------------------------------------------32
Q ss_pred CCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 22344442133106888579998403332345641012334576523442278875124204688689999999998630
Q gi|254780751|r 161 PKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGETISRKITNPVDRKNLKEIARGLE 240 (723)
Q Consensus 161 ~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kga~lT~~isl~Gry~Vl~P~~~~~~~iSrki~~~~~r~~l~~~~~~~~ 240 (723)
T Consensus 84 ~~~~~~~~~I~~~l~~Gq~ilVQV~Ke~~~~KGa~lT~~isl~GRylVl~P~~-~~igiSrkI~~~~eR~rLk~i~~~~- 161 (489)
T PRK11712 84 EQKQFVVRDISELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGA-SHVGVSQRIESEEERERLKKIVAPY- 161 (489)
T ss_pred CCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCC-CCCCCCCCCCCHHHHHHHHHHHHHC-
T ss_conf 23566646767746799989999962687898876751255453269995389-9876431679878999999988853-
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCHHHH
Q ss_conf 02587169985045575799999999999999987764201432212345645888888752376631111035320366
Q gi|254780751|r 241 VPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVRELALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYRE 320 (723)
Q Consensus 241 ~~~~~G~IiRT~a~~~~~~~l~~d~~~L~~~w~~i~~~~~~~~~p~li~~~~~~~~~~ird~~~~~~~~i~vd~~~~~~~ 320 (723)
T Consensus 162 ~~~~~G~IiRT~a~~~~~e~l~~d~~~L~~~W~~I~~~~~~~~~p~ll~~e~~~~~r~lRD~~~~~~~~I~vD~~~~~~~ 241 (489)
T PRK11712 162 CDEQGGFIIRTAAEGVGEEELAQDAAFLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFVGAELDRIRVDSRLTYEE 241 (489)
T ss_pred CCCCCCEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHH
T ss_conf 88888669841320299999999999999999999999854999614642723899999984477652788578899999
Q ss_pred HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf 78889876310121122013442035677699999998422214367864998328806999823755444555114799
Q gi|254780751|r 321 AKDFMKLLMPSYARIVRQYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRSTREHCIEDTAL 400 (723)
Q Consensus 321 ~~~~~~~~~p~~~~~v~~~~~~~~lf~~y~ie~~i~~~~~~~V~L~sGG~lvIe~TEALt~IDVNSG~~~~~~~~e~t~l 400 (723)
T Consensus 242 ~~~~~~~~~p~~~~~v~~y~~~~plF~~y~ie~~I~~~l~~~V~L~sGG~lvIe~TEALt~IDVNSG~~~g~~~~eet~~ 321 (489)
T PRK11712 242 LKEFTSEYIPELTDKLEHYSGRQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIF 321 (489)
T ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHH
T ss_conf 99999875941001134326862177642899999997168077389878999426100798505765457777678899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCHHHHH
Q ss_conf 99999999999987310368638960334798888999999999973127872899860486148985156663011210
Q gi|254780751|r 401 QTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVGAISNFGLLEMSRQRIRSSVLEST 480 (723)
Q Consensus 401 ~tNleAA~EIaRQlRLRnlgGiIvIDFIdM~~~~~~~~v~~~l~~~l~~D~~~~~v~~it~lGLlEltRkR~r~sl~e~~ 480 (723)
T Consensus 322 ~tNlEAA~EIaRQLRLRnigGiIvIDFIDM~~~~~~~~V~~~l~~~l~~Dr~k~~v~~is~lGLvEmTRkR~r~sl~~~~ 401 (489)
T PRK11712 322 NTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTNINGFSQLGLVEMTRKRTRESLEHVL 401 (489)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEHHCCCCHHHHC
T ss_conf 98999999999998635578869998447998688999999999997468987078564777207996221033757770
Q ss_pred CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf 02367546537860611468998878899973036431013576999998730237999999998488799984787788
Q gi|254780751|r 481 TKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGIELAD 560 (723)
Q Consensus 481 ~~~c~~c~g~g~~~~~~~~~~~~~r~i~~~~~~~~~~~i~v~~~~~va~~lln~kr~~l~~lE~~~~~~I~i~~d~~l~~ 560 (723)
T Consensus 402 ~~~Cp~C~G~G~v~s~et~~~~i~R~i~~~~~~~~~~~i~v~~~~~v~~~l~~~~~~~l~~lE~~~~~~i~i~~d~~~~~ 481 (489)
T PRK11712 402 CGECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHALAELEVFIGKQVKVQIEPLYNQ 481 (489)
T ss_pred CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 78699889872655899999999999999986578873999988999999871578999999998599389995899886
Q ss_pred CCEEEE
Q ss_conf 633897
Q gi|254780751|r 561 KLFYIE 566 (723)
Q Consensus 561 ~~f~Ie 566 (723)
T Consensus 482 e~~~iv 487 (489)
T PRK11712 482 EQFDVV 487 (489)
T ss_pred CCEEEE
T ss_conf 763899