HHsearch alignment for GI: 254780751 and conserved domain: PRK11712

>PRK11712 ribonuclease G; Provisional.
Probab=100.00  E-value=0  Score=1157.64  Aligned_cols=487  Identities=32%  Similarity=0.521  Sum_probs=467.5

Q ss_pred             CCCEEEEECCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCC
Q ss_conf             98526896528960799999899899999607334604287879899783638823135327897713022213712102
Q gi|254780751|r    1 MANKMLIDASHVEETRVVVLRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQ   80 (723)
Q Consensus         1 M~k~~lI~~~~~~e~Rvav~e~g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~   80 (723)
T Consensus         1 M~~eilIn~~-~~E~RvAlle~g~L~el~iE~~~~~~~vGnIY~G~V~~V~pgl~AAFVdiG~~k~gFL~~~di~~~~~~   79 (489)
T PRK11712          1 MTAELLVNVT-PSETRVALIEGGILQEIHIEREAKRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIVPHTEC   79 (489)
T ss_pred             CCCEEEEECC-CCEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEHHHCCCCHHC
T ss_conf             9856999789-983699999999999999855888776676699999430688776999847987428785543852111


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89889999999888631111100000001112233444334454222233445543322223432112211121100001
Q gi|254780751|r   81 IPFSDRQALLKESNIAQTDSEAVADDVTHGDVTIPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDV  160 (723)
Q Consensus        81 ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (723)
T Consensus        80 ~~----------------------------------------------------------------------------~~   83 (489)
T PRK11712         80 VA----------------------------------------------------------------------------GE   83 (489)
T ss_pred             CC----------------------------------------------------------------------------CC
T ss_conf             33----------------------------------------------------------------------------32


Q ss_pred             CCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             22344442133106888579998403332345641012334576523442278875124204688689999999998630
Q gi|254780751|r  161 PKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGETISRKITNPVDRKNLKEIARGLE  240 (723)
Q Consensus       161 ~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kga~lT~~isl~Gry~Vl~P~~~~~~~iSrki~~~~~r~~l~~~~~~~~  240 (723)
T Consensus        84 ~~~~~~~~~I~~~l~~Gq~ilVQV~Ke~~~~KGa~lT~~isl~GRylVl~P~~-~~igiSrkI~~~~eR~rLk~i~~~~-  161 (489)
T PRK11712         84 EQKQFVVRDISELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGA-SHVGVSQRIESEEERERLKKIVAPY-  161 (489)
T ss_pred             CCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCC-CCCCCCCCCCCHHHHHHHHHHHHHC-
T ss_conf             23566646767746799989999962687898876751255453269995389-9876431679878999999988853-


Q ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCHHHH
Q ss_conf             02587169985045575799999999999999987764201432212345645888888752376631111035320366
Q gi|254780751|r  241 VPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVRELALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYRE  320 (723)
Q Consensus       241 ~~~~~G~IiRT~a~~~~~~~l~~d~~~L~~~w~~i~~~~~~~~~p~li~~~~~~~~~~ird~~~~~~~~i~vd~~~~~~~  320 (723)
T Consensus       162 ~~~~~G~IiRT~a~~~~~e~l~~d~~~L~~~W~~I~~~~~~~~~p~ll~~e~~~~~r~lRD~~~~~~~~I~vD~~~~~~~  241 (489)
T PRK11712        162 CDEQGGFIIRTAAEGVGEEELAQDAAFLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFVGAELDRIRVDSRLTYEE  241 (489)
T ss_pred             CCCCCCEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHH
T ss_conf             88888669841320299999999999999999999999854999614642723899999984477652788578899999


Q ss_pred             HHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             78889876310121122013442035677699999998422214367864998328806999823755444555114799
Q gi|254780751|r  321 AKDFMKLLMPSYARIVRQYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRSTREHCIEDTAL  400 (723)
Q Consensus       321 ~~~~~~~~~p~~~~~v~~~~~~~~lf~~y~ie~~i~~~~~~~V~L~sGG~lvIe~TEALt~IDVNSG~~~~~~~~e~t~l  400 (723)
T Consensus       242 ~~~~~~~~~p~~~~~v~~y~~~~plF~~y~ie~~I~~~l~~~V~L~sGG~lvIe~TEALt~IDVNSG~~~g~~~~eet~~  321 (489)
T PRK11712        242 LKEFTSEYIPELTDKLEHYSGRQPIFDLYDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIF  321 (489)
T ss_pred             HHHHHHHHCCCCCCEEEECCCCCHHHHHCCHHHHHHHHHCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHH
T ss_conf             99999875941001134326862177642899999997168077389878999426100798505765457777678899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCHHHHH
Q ss_conf             99999999999987310368638960334798888999999999973127872899860486148985156663011210
Q gi|254780751|r  401 QTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVGAISNFGLLEMSRQRIRSSVLEST  480 (723)
Q Consensus       401 ~tNleAA~EIaRQlRLRnlgGiIvIDFIdM~~~~~~~~v~~~l~~~l~~D~~~~~v~~it~lGLlEltRkR~r~sl~e~~  480 (723)
T Consensus       322 ~tNlEAA~EIaRQLRLRnigGiIvIDFIDM~~~~~~~~V~~~l~~~l~~Dr~k~~v~~is~lGLvEmTRkR~r~sl~~~~  401 (489)
T PRK11712        322 NTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTNINGFSQLGLVEMTRKRTRESLEHVL  401 (489)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEHHCCCCHHHHC
T ss_conf             98999999999998635578869998447998688999999999997468987078564777207996221033757770


Q ss_pred             CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf             02367546537860611468998878899973036431013576999998730237999999998488799984787788
Q gi|254780751|r  481 TKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGIELAD  560 (723)
Q Consensus       481 ~~~c~~c~g~g~~~~~~~~~~~~~r~i~~~~~~~~~~~i~v~~~~~va~~lln~kr~~l~~lE~~~~~~I~i~~d~~l~~  560 (723)
T Consensus       402 ~~~Cp~C~G~G~v~s~et~~~~i~R~i~~~~~~~~~~~i~v~~~~~v~~~l~~~~~~~l~~lE~~~~~~i~i~~d~~~~~  481 (489)
T PRK11712        402 CGECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHALAELEVFIGKQVKVQIEPLYNQ  481 (489)
T ss_pred             CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             78699889872655899999999999999986578873999988999999871578999999998599389995899886


Q ss_pred             CCEEEE
Q ss_conf             633897
Q gi|254780751|r  561 KLFYIE  566 (723)
Q Consensus       561 ~~f~Ie  566 (723)
T Consensus       482 e~~~iv  487 (489)
T PRK11712        482 EQFDVV  487 (489)
T ss_pred             CCEEEE
T ss_conf             763899