HHsearch alignment for GI: 254780751 and conserved domain: TIGR03147

>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.

Probab=90.07  E-value=0.8  Score=24.84  Aligned_cols=58  Identities=19%  Similarity=0.247  Sum_probs=46.5

Q ss_pred             CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECC
Q ss_conf             0236754653786061146899887889997303643101357699999873023799999999848879998478
Q gi|254780751|r  481 TKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIGI  556 (723)
Q Consensus       481 ~~~c~~c~g~g~~~~~~~~~~~~~r~i~~~~~~~~~~~i~v~~~~~va~~lln~kr~~l~~lE~~~~~~I~i~~d~  556 (723)
T Consensus        40 ~lRCpvCq~qsi~~S~a~~A~dmR~~I~~~i~~G~s------------------d~eI~~~l~~RYG~~Il~~Pp~   97 (126)
T TIGR03147        40 SLRCPQCQNQNLVESNSPIAYDLRHEVYSMVNEGKS------------------NQQIIDFMTARFGDFVLYNPPF   97 (126)
T ss_pred             HCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCC------------------HHHHHHHHHHHCCCEEEECCCC
T ss_conf             168877799774007619999999999999985999------------------8999999999708828753999