HHsearch alignment for GI: 254780751 and conserved domain: TIGR03591
>TIGR03591 polynuc_phos polyribonucleotide nucleotidyltransferase. Members of this protein family are polyribonucleotide nucleotidyltransferase, also called polynucleotide phosphorylase. Some members have been shown also to have additional functions as guanosine pentaphosphate synthetase and as poly(A) polymerase (see model TIGR02696 for an exception clade, within this family).
Probab=97.99 E-value=1.1e-05 Score=58.54 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=34.2
Q ss_pred CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 310135769999987302379999999984887999847
Q gi|254780751|r 517 HNIIVHTHSDVVLYLLNQKRATIVEYEARFGVSINVVIG 555 (723)
Q Consensus 517 ~~i~v~~~~~va~~lln~kr~~l~~lE~~~~~~I~i~~d 555 (723)
T Consensus 551 ~i~~~~i~~~ki~~vIG~gGk~Ik~i~~~tg~~I~i~dd 589 (684)
T TIGR03591 551 RIETIKINPDKIRDVIGPGGKVIREITEETGAKIDIEDD 589 (684)
T ss_pred EEEEEEECHHHHHHEECCCCHHHHHHHHHHCCEEEEECC
T ss_conf 579999787886650787528898999988988998589