HHsearch alignment for GI: 254780751 and conserved domain: cd00164

>cd00164 S1_like S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains are members of the Oligonucleotide/oligosaccharide Binding (OB) fold.

Probab=96.90  E-value=0.0016  Score=43.54  Aligned_cols=34  Identities=18%  Similarity=0.346  Sum_probs=29.8

Q ss_pred             EEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCC
Q ss_conf             798997836388231353278977130222137121
Q gi|254780751|r   43 YLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDY   78 (723)
Q Consensus        43 Y~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y   78 (723)
T Consensus         1 v~G~V~~i~~~--G~fV~~~~~~~gli~~s~~s~~~   34 (65)
T cd00164           1 VTGKVVSITKF--GVFVELEDGVEGLVHISELSDKF   34 (65)
T ss_pred             CEEEEEEEECC--EEEEEECCCEEEEEEHHHHCCCC
T ss_conf             98999999784--59999898717889888916765