HHsearch alignment for GI: 254780751 and conserved domain: cd05684

>cd05684 S1_DHX8_helicase S1_DHX8_helicase: The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing the RNA from the spliceosome. DHX8 is also known as HRH1 (human RNA helicase 1) in Homo sapiens and PRP22 in Saccharomyces cerevisiae.

Probab=97.63  E-value=1e-04  Score=51.95  Aligned_cols=36  Identities=28%  Similarity=0.530  Sum_probs=31.4

Q ss_pred             CCEEEEEEEEECCCCCEEEEEEC---CCCCCCCCHHHCCCC
Q ss_conf             87879899783638823135327---897713022213712
Q gi|254780751|r   40 GNIYLAKVTRVEPSLQAAFVDYG---GNRHGFLPFLEIHPD   77 (723)
Q Consensus        40 GnIY~G~V~~V~p~lqAAFVdiG---~~k~gFL~~~ei~~~   77 (723)
T Consensus         1 G~i~~G~V~~i~~--fGaFV~l~~~~~~~~GLvHiSeis~~   39 (79)
T cd05684           1 GKIYKGKVTSIMD--FGCFVQLEGLKGRKEGLVHISQLSFE   39 (79)
T ss_pred             CCEEEEEEEEEEE--EEEEEEEECCCCCCEEEEEHHHCCCC
T ss_conf             9999999989975--33999996788980678995681575