HHsearch alignment of GI: 254780751 and MMDB domain: 2ba0_A_54-135

>2ba0_A (A:54-135) Archeal exosome RNA binding protein RRP4; RNAse PH, RNA degradation, exoribonuclease, S1domain, KH domain, archaeal; 2.70A {Archaeoglobus fulgidus}

Probab=98.00  E-value=2.2e-05  Score=56.02  Aligned_cols=40  Identities=20%  Similarity=0.180  Sum_probs=36.4

Q ss_pred             CCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCC
Q ss_conf             428787989978363882313532789771302221371210
Q gi|254780751|r   38 IKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYY   79 (723)
Q Consensus        38 ~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~   79 (723)
                      .+|.||.|+|++|.|.  .|||+||.+..||||++|+.++++
T Consensus         3 ~~G~~v~g~V~~i~~~--g~~V~l~~~~~g~i~~sel~~~~~   42 (82)
T 2ba0_A            3 SVGDVVIGIIREVAAN--GWAVDIYSPYQAFLPVSENPEMKP   42 (82)
T ss_dssp             CTTCEEEEEEEEECSS--EEEEECSSSSCEEEEGGGCTTCCT
T ss_pred             CCCCEEEEEEEEECCC--EEEEECCCCCCEEEEHHHCCCCCH
T ss_conf             8999999999576165--199980897337987676766101