HHsearch alignment of GI: 254780751 and MMDB domain: 2bx2_L_1-42_219-272

>2bx2_L (L:1-42,L:219-272) Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=99.46  E-value=3.3e-13  Score=110.44  Aligned_cols=53  Identities=30%  Similarity=0.542  Sum_probs=48.9

Q ss_pred             CHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHH-HHCCCCHHHHCCCCCHH
Q ss_conf             588888875237663111103532036678889876-31012112201344203
Q gi|254780751|r  293 NLIKRAIRDLYCKDISEIIVSGEKGYREAKDFMKLL-MPSYARIVRQYEDPHPI  345 (723)
Q Consensus       293 ~~~~~~ird~~~~~~~~i~vd~~~~~~~~~~~~~~~-~p~~~~~v~~~~~~~~l  345 (723)
                      +++.|++||+++.++++|+||+++.|+.+++|++.+ +|.+..+|++|+++.||
T Consensus        43 DLi~RviRD~~t~dv~eIvVD~~e~Ye~v~~fv~~~~~P~l~~rVklY~g~~PI   96 (96)
T 2bx2_L           43 NVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPL   96 (96)
T ss_dssp             CHHHHHHHHHCCTTEEEEEESCHHHHHHHHHHHHHTTCHHHHTTEEECCCSSCH
T ss_pred             CHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCH
T ss_conf             489999998614143410068788999999863442287533558954799787