HHsearch alignment of GI: 254780751 and MMDB domain: 2bx2_L_411-517

>2bx2_L (L:411-517) Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=99.77  E-value=1.8e-18  Score=147.01  Aligned_cols=96  Identities=26%  Similarity=0.400  Sum_probs=90.0

Q ss_pred             CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH-CCEEEEEECCCCCCCC
Q ss_conf             675465378606114689988788999730364310135769999987302379999999984-8879998478778863
Q gi|254780751|r  484 CTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARF-GVSINVVIGIELADKL  562 (723)
Q Consensus       484 c~~c~g~g~~~~~~~~~~~~~r~i~~~~~~~~~~~i~v~~~~~va~~lln~kr~~l~~lE~~~-~~~I~i~~d~~l~~~~  562 (723)
                      ||+|+|+|+|+|.+|++++|+|+|++.+.+.+...+.+.+||+||.||+|++|..|.+||.+| |+.|.|.+|++++.++
T Consensus         1 CP~C~G~G~V~s~es~a~~i~R~I~~~~~~~~~~~i~v~v~p~Va~~l~n~k~~~l~~lE~~~~g~~I~i~~d~~~~~~~   80 (107)
T 2bx2_L            1 CPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPH   80 (107)
T ss_dssp             CSSSSSSSCCCCHHHHHHHHHHHHHHHHHSTTEEEEEEEECHHHHHHHTTTTHHHHHHHHHHTTTCEEEEEECTTCCTTC
T ss_pred             CCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
T ss_conf             88878866875789999999999999987668866999989999999973129999999998769179999579887775


Q ss_pred             EEEEECCCCCCCCCCCC
Q ss_conf             38971554433333211
Q gi|254780751|r  563 FYIEKGSPVQALVNTGH  579 (723)
Q Consensus       563 f~Ier~~~~~~~~~~~~  579 (723)
                      |.|...+..+......+
T Consensus        81 f~i~~~~~~~~~~~~~~   97 (107)
T 2bx2_L           81 YHVLRVRKGEETPTLSY   97 (107)
T ss_dssp             CEEEEEETTCCCCCCGG
T ss_pred             EEEEECCCCCCCCCCCE
T ss_conf             39998448986565462