HHsearch alignment of GI: 254780751 and MMDB domain: 2ckz_B_81-218
>2ckz_B (B:81-218) C25, DNA-directed RNA polymerase III 25 KD polypeptide; multiprotein complex, nucleotidyltransferase, nuclear protein, hypothetical protein; 3.2A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.0024 Score=41.91 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=61.5
Q ss_pred CCCEEEEEEEEECCCCCEEEEEE-CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 28787989978363882313532-78977130222137121028988999999988863111110000000111223344
Q gi|254780751|r 39 KGNIYLAKVTRVEPSLQAAFVDY-GGNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVTIPND 117 (723)
Q Consensus 39 ~GnIY~G~V~~V~p~lqAAFVdi-G~~k~gFL~~~ei~~~y~~ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (723)
+|.||.|+|++|.+ ..+||++ |....||+|.+++..+|+.-|..
T Consensus 1 VGei~~G~V~~v~~--~GifV~L~~~~~egli~~s~L~d~~~~~~~~--------------------------------- 45 (138)
T 2ckz_B 1 LGEIVTGWISKCTA--EGIKVSLLGIFDDIFIPQNMLFEGCYYTPEE--------------------------------- 45 (138)
T ss_dssp TTCEEEEEEEEEET--TEEEEECTTSCCCEEEETTTSCTTCEEETTT---------------------------------
T ss_pred CCCEEEEEEEEECC--CEEEEEECCCCCCEEEEHHHCCCCCEECHHC---------------------------------
T ss_conf 78599999971516--5499993387365385077678985793112---------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCC
Q ss_conf 43344542222334455433222234321122111211000012234444213310688857999840333234564101
Q gi|254780751|r 118 HSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVT 197 (723)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kga~lT 197 (723)
..............++.||.|-|+|..--..+.-..|+
T Consensus 46 ------------------------------------------~~~~~~~~~~~~~~~~~Gd~V~vkV~~vd~~~~~i~ls 83 (138)
T 2ckz_B 46 ------------------------------------------SAWIWPMDEETKLYFDVNEKIRFRIEREVFVDVKPKSP 83 (138)
T ss_dssp ------------------------------------------TEEEEECC--CEEEECTTCEEEEEEEEEEECCCCC---
T ss_pred ------------------------------------------CEEEEECCCCCCEEECCCCEEEEEEEEEEEECCCCCCC
T ss_conf ------------------------------------------55997248745609758998999999999642799873
Q ss_pred CCCCCCCCC
Q ss_conf 233457652
Q gi|254780751|r 198 TYLSLAGRY 206 (723)
Q Consensus 198 ~~isl~Gry 206 (723)
..=......
T Consensus 84 l~~~~~~~~ 92 (138)
T 2ckz_B 84 KERELEERA 92 (138)
T ss_dssp ---------
T ss_pred CCCCCCCCC
T ss_conf 100123223