HHsearch alignment of GI: 254780751 and MMDB domain: 2k4k_A_

>2k4k_A (A:) GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=97.98  E-value=2.2e-05  Score=56.01  Aligned_cols=100  Identities=17%  Similarity=0.272  Sum_probs=78.8

Q ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             60428787989978363882313532789771302221371210289889999999888631111100000001112233
Q gi|254780751|r   36 KQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTDSEAVADDVTHGDVTIP  115 (723)
Q Consensus        36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~ip~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (723)
                      ...+|.||.|+|++|.+.  ++||+++.+-.||+|.+|+..+|+.                                   
T Consensus         4 ~~~~G~iv~g~V~~v~~~--G~~V~l~~~i~G~i~~sels~~~~~-----------------------------------   46 (130)
T 2k4k_A            4 KFEVGSVYTGKVTGLQAY--GAFVALDEETQGLVHISEVTHGFVK-----------------------------------   46 (130)
T ss_dssp             CCCTTCEEEEEEEEEETT--EEEEEEETTEEEEEEGGGTSSSCCS-----------------------------------
T ss_pred             CCCCCCEEEEEEEEEECC--EEEEEECCCCEEEEEEEEECCEECC-----------------------------------
T ss_conf             468999999999999787--6999979995899873010100011-----------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCC
Q ss_conf             44433445422223344554332222343211221112110000122344442133106888579998403332345641
Q gi|254780751|r  116 NDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAA  195 (723)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~gq~ilVQV~ke~~~~Kga~  195 (723)
                                                                           .+.+.++.||.|.|.|..-...++...
T Consensus        47 -----------------------------------------------------~~~~~~~~G~~i~~~V~~vd~~~~~i~   73 (130)
T 2k4k_A           47 -----------------------------------------------------DINEHLSVGDEVQVKVLAVDEEKGKIS   73 (130)
T ss_dssp             -----------------------------------------------------CGGGTCCTTCEEEEEEEEEETTTTEEE
T ss_pred             -----------------------------------------------------CCCCCCCCCCEEEEEEEEEECCCCEEE
T ss_conf             -----------------------------------------------------223345699899999999978999899


Q ss_pred             CCCCCC--CCCCCEEECCCCCCCCEEEECCCCH
Q ss_conf             012334--5765234422788751242046886
Q gi|254780751|r  196 VTTYLS--LAGRYSVLMPNTSKGETISRKITNP  226 (723)
Q Consensus       196 lT~~is--l~Gry~Vl~P~~~~~~~iSrki~~~  226 (723)
                      ||....  -++......++. ...+.+.++.+.
T Consensus        74 LS~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  105 (130)
T 2k4k_A           74 LSIRATQAAPEKKESKPRKP-KAAQVSEEASTP  105 (130)
T ss_dssp             EESHHHHHSCCCCSCCTTTT-CTTCCSCCCSCS
T ss_pred             EEEEECCCCCHHHHHHHCCC-CCCCCEEEECCC
T ss_conf             99677556914554311146-666423474265