HHsearch alignment of GI: 254780751 and MMDB domain: 2khi_A_
>2khi_A (A:) 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=98.19 E-value=4.6e-06 Score=60.75 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=74.3
Q ss_pred EECCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 98998999996073346042878798997836388231353278977130222137121028988999999988863111
Q gi|254780751|r 20 LRDNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQIPFSDRQALLKESNIAQTD 99 (723)
Q Consensus 20 ~e~g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~ip~~d~~~l~~~~~~~~~~ 99 (723)
.-.-+..+..++..-....+|.||.|+|++|.|. ++||++|.+-.||||++|+..+++.
T Consensus 11 ~~s~k~~~~~~~~~~~~~~~G~iv~G~V~~v~~~--G~fV~l~~~~~g~i~~~els~~~~~------------------- 69 (115)
T 2khi_A 11 SSGLVPRGSHWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKN------------------- 69 (115)
T ss_dssp ----------CCCSSCSSCSSCEEEEEEEEEETT--EEEEECSTTCEEEEETTSSSCSSTT-------------------
T ss_pred CCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEECC--EEEEEECCCCCEEEEEEEECCCCCC-------------------
T ss_conf 2474447997899996589989999999999687--5999989857223787631344422-------------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCE
Q ss_conf 11000000011122334443344542222334455433222234321122111211000012234444213310688857
Q gi|254780751|r 100 SEAVADDVTHGDVTIPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVEDVKGGSPEDVPKKFKRQYCIQEVIKNRQI 179 (723)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~gq~ 179 (723)
..+.++++.||.
T Consensus 70 --------------------------------------------------------------------~~~~~~~~~G~~ 81 (115)
T 2khi_A 70 --------------------------------------------------------------------IHPSKVVNVGDV 81 (115)
T ss_dssp --------------------------------------------------------------------CSSTTTCCTTCE
T ss_pred --------------------------------------------------------------------CCCEEEEECCCE
T ss_conf --------------------------------------------------------------------232048843866
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 9998403332345641012334576
Q gi|254780751|r 180 LLVQIVKEERGNKGAAVTTYLSLAG 204 (723)
Q Consensus 180 ilVQV~ke~~~~Kga~lT~~isl~G 204 (723)
|.|.|.+--..++-..||..-..+.
T Consensus 82 v~v~V~~vd~~~~ri~lS~k~~~~~ 106 (115)
T 2khi_A 82 VEVMVLDIDEERRRISLGLKQCKAN 106 (115)
T ss_dssp EEEEEEEEETTTTEEEECCCCCCSS
T ss_pred EEEEEEEEECCCCEEEEEEEECCCC
T ss_conf 9999999989999999998765409