HHsearch alignment of GI: 254780751 and MMDB domain: 2nn6_G_123-209

>2nn6_G (G:123-209) Exosome complex exonuclease RRP40; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens}

Probab=97.75  E-value=7.6e-05  Score=52.33  Aligned_cols=39  Identities=26%  Similarity=0.350  Sum_probs=34.6

Q ss_pred             CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCC
Q ss_conf             04287879899783638823135327897713022213712
Q gi|254780751|r   37 QIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPD   77 (723)
Q Consensus        37 ~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~   77 (723)
                      ..+|.|+.|+|++|.+  .+||||||.+..||||.+++..+
T Consensus         3 P~~GdiV~G~V~~i~~--~g~fVdi~~~~~g~l~is~~~~~   41 (87)
T 2nn6_G            3 PVKGDHVIGIVTAKSG--DIFKVDVGGSEPASLSYLSFEGA   41 (87)
T ss_dssp             CCSSEEEEEEEEEEET--TEEEEECSSSSCCCEESCSSSCC
T ss_pred             CCCCCEEEEEEEEECC--CEEEEECCCCCCEEECCHHCCCC
T ss_conf             9998999999989828--73899848985048750206770