HHsearch alignment of GI: 254780751 and MMDB domain: 3go5_A_136-219

>3go5_A (A:136-219) Multidomain protein with S1 RNA-binding domains; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Streptococcus pneumoniae TIGR4}

Probab=96.50  E-value=0.0088  Score=37.97  Aligned_cols=39  Identities=26%  Similarity=0.255  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEECCCC-CCCCCHHHCCC
Q ss_conf             604287879899783638823135327897-71302221371
Q gi|254780751|r   36 KQIKGNIYLAKVTRVEPSLQAAFVDYGGNR-HGFLPFLEIHP   76 (723)
Q Consensus        36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k-~gFL~~~ei~~   76 (723)
                      ....|.+|.|+|++|.|.  ++||++.... .||||.+|+..
T Consensus        14 ~~~~G~~~~g~V~~i~~~--G~fV~l~~~~~eGlv~~sel~~   53 (84)
T 3go5_A           14 NNXQNQNWPAIVYRLKLS--GTFVYLPENNXLGFIHPSERYA   53 (84)
T ss_dssp             SCCTTCEEEEEEEEEETT--EEEEEETTTTEEEEECGGGCSS
T ss_pred             HCCCCCEEEEEEEEEECC--CCEEEECCCCEEEEECCCCCCC
T ss_conf             325999999999999748--7189843787899963541244