HHsearch alignment of GI: 254780751 and MMDB domain: 3h0g_G_84-172
>3h0g_G (G:84-172) DNA-directed RNA polymerase II subunit RPB7; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=97.10 E-value=0.00058 Score=46.20 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=35.0
Q ss_pred CCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCC
Q ss_conf 287879899783638823135327897713022213712102
Q gi|254780751|r 39 KGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQ 80 (723)
Q Consensus 39 ~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~ 80 (723)
+|+||.|+|++|.+. +|||++| +-.||+|.+++.++|..
T Consensus 1 kG~i~~G~V~~i~~~--G~FV~l~-~~eG~v~~s~l~~d~~~ 39 (89)
T 3h0g_G 1 RGEVVDAIVTTVNKM--GFFANIG-PLNVFVSSHLVPPDMKF 39 (89)
T ss_dssp TTCEEECCCCEEETT--EEECCBT-TBCCEEEGGGSCTTCCC
T ss_pred CCCEEEEEEEEEECC--EEEEEEE-CCCEEEEHHHCCCCCCC
T ss_conf 898999999688055--5999940-64157441211554311