HHsearch results for GI: 254780751 and protein with PDBid: 1go3_E
>1go3_E DNA-directed RNA polymerase subunit E; transferase, transferase, transcription; 1.75A {Methanococcus jannaschii} SCOP: b.40.4.5 d.230.1.1
Probab=95.86 E-value=0.03 Score=33.25 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=44.8
Q ss_pred CCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCC
Q ss_conf 99899999607334604287879899783638823135327897713022213712102
Q gi|254780751|r 22 DNRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDYYQ 80 (723)
Q Consensus 22 ~g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y~~ 80 (723)
+......-++-.--+..+|.+|-|+|++|-. .++||.+|. -.||+|.+.+.+|||.
T Consensus 64 g~~~~~v~f~~~v~~p~~gev~~g~V~~v~~--~Gifv~i~~-~~~~~~~~~~~~d~~~ 119 (187)
T 1go3_E 64 GSAYHPVVFETLVYIPEMYELIEGEVVDVVE--FGSFVRLGP-LDGLIHVSQIMDDYVS 119 (187)
T ss_dssp CSEEEEEEEEEEEECCCTTCEEEEEEEEEET--TEEEEECSS-SEEEEEGGGSCSSCEE
T ss_pred CCEEEEEEEEEEEEECCCCCEEEEEEEEEEE--EEEEEEECC-CCCCCCHHHCCCCCEE
T ss_conf 8679999999999954689899999998872--048999458-4430107783897466