HHsearch results for GI: 254780751 and protein with PDBid: 2nn6_I

>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2

Probab=94.98  E-value=0.073  Score=30.53  Aligned_cols=36  Identities=19%  Similarity=0.187  Sum_probs=25.9

Q ss_pred             CCCCCEEEEEEEEECCCCCEEEEEE--------CCCCCCCCCHHHC
Q ss_conf             0428787989978363882313532--------7897713022213
Q gi|254780751|r   37 QIKGNIYLAKVTRVEPSLQAAFVDY--------GGNRHGFLPFLEI   74 (723)
Q Consensus        37 ~~~GnIY~G~V~~V~p~lqAAFVdi--------G~~k~gFL~~~ei   74 (723)
                      ..+|+|..|+|++|-+  +-|+|||        ...-.|+|+.+||
T Consensus        79 P~vGDiViGrV~~v~~--~~a~V~I~~v~~~~l~~~~~g~l~~~dv  122 (209)
T 2nn6_I           79 PDVGAIVTCKVSSINS--RFAKVHILYVGSMPLKNSFRGTIRKEDV  122 (209)
T ss_dssp             CCTTCEEEEEEEEECS--SEEEEEEEESSSSCCCCSSCSCEEEEGG
T ss_pred             CCCCCEEEEEEEEECC--CEEEEEEEEECCEECCCCCCCCCCHHHC
T ss_conf             9889999999999847--8799999998787257650123678884