HHsearch results for GI: 254780751 and protein with PDBid: 3cw2_C

>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B

Probab=97.73  E-value=5.4e-05  Score=52.27  Aligned_cols=41  Identities=27%  Similarity=0.526  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEEEEEECCCCCEEEEEEC--CCCCCCCCHHHCCCCC
Q ss_conf             604287879899783638823135327--8977130222137121
Q gi|254780751|r   36 KQIKGNIYLAKVTRVEPSLQAAFVDYG--GNRHGFLPFLEIHPDY   78 (723)
Q Consensus        36 ~~~~GnIY~G~V~~V~p~lqAAFVdiG--~~k~gFL~~~ei~~~y   78 (723)
                      -.-+|.++.|+|++|.+.  +|||+++  .+..||+|++||++.+
T Consensus         8 ~Pe~G~iv~g~V~~i~~~--G~fV~l~ey~~~eG~i~~sEis~~~   50 (266)
T 3cw2_C            8 LPSEGEILIATVKQVFDY--GSYVSLDEYGGLQAFLPWSEVSSKW   50 (266)
T ss_dssp             SCCTTCEEEEEEEECCSS--SBEEEETTTTSEECBBCGGGSSCSS
T ss_pred             CCCCCCEEEEEEEEEECC--EEEEEECCCCCEEEEEEHHHCCCCC
T ss_conf             989999999999999833--5999975779908998989968864