HHsearch results for GI: 254780751 and protein with PDBid: 3go5_A

>3go5_A Multidomain protein with S1 RNA-binding domains; joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.40A {Streptococcus pneumoniae TIGR4}

Probab=96.68  E-value=0.0099  Score=36.57  Aligned_cols=62  Identities=15%  Similarity=0.164  Sum_probs=41.7

Q ss_pred             CCEEEEEEEEC--CEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECC-CCCCCCCHHHCCCC
Q ss_conf             96079999989--98999996073346042878798997836388231353278-97713022213712
Q gi|254780751|r   12 VEETRVVVLRD--NRVEELDFESEHKKQIKGNIYLAKVTRVEPSLQAAFVDYGG-NRHGFLPFLEIHPD   77 (723)
Q Consensus        12 ~~e~Rvav~e~--g~l~e~~~e~~~~~~~~GnIY~G~V~~V~p~lqAAFVdiG~-~k~gFL~~~ei~~~   77 (723)
                      +++..|-|..|  +++.-   ....-.-.+|.+..|+|..|.++. +||||+|. ++.+|+|+++.++.
T Consensus        43 Gd~i~Vfvy~D~e~r~~a---T~~~p~~~vGe~~~~kVv~v~~~~-GaFvD~Gl~~kdl~vp~~~~~~~  107 (285)
T 3go5_A           43 GDTVKGFAYTDMKQKLRL---TTLEVTATQDQFGWGRVTEVRKDL-GVFVDTGLPDKEIVVSLDILPEL  107 (285)
T ss_dssp             TSEEEEEEEECTTSCEEE---ECSCCCSCSSSCEEEEEEEEETTT-EEEEECSCTTCCEEEEGGGSCSS
T ss_pred             CCEEEEEEEECCCCCEEE---ECCCCCEECCCEEEEEEEEEECCE-EEEEEECCCCCCCCCCHHHCCCC
T ss_conf             999999999988898984---136774623989999999982672-69999568764533330326733