HHSEARCH alignment of GI: 254780751 and SCOP domain: d2ahob2

Alignment

Probab=97.43  E-value=6.4e-05  Score=50.12  Aligned_cols=42  Identities=26%  Similarity=0.482  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEEEEEECCCCCEEEEEECC--CCCCCCCHHHCCCCC
Q ss_conf             46042878798997836388231353278--977130222137121
Q gi|254780751|r   35 KKQIKGNIYLAKVTRVEPSLQAAFVDYGG--NRHGFLPFLEIHPDY   78 (723)
Q Consensus        35 ~~~~~GnIY~G~V~~V~p~lqAAFVdiG~--~k~gFL~~~ei~~~y   78 (723)
                      ....+|.|+.|+|++|.+  .++||+++.  +-.||+|.+|++.++
T Consensus         7 ~~p~~G~iv~G~V~~v~~--~G~fV~l~~~~gi~Gli~~sels~~~   50 (84)
T d2ahob2           7 KLPSEGEILIATVKQVFD--YGSYVSLDEYGGLQAFLPWSEVSSKW   50 (84)
T ss_dssp             SSCCTTCCCEEEEEEEET--TEEEEEETTTTTEEEEECGGGCC---
T ss_pred             CCCCCCCEEEEEEEEEEC--CEEEEEECCCCCEEEEEECCCCCCCC
T ss_conf             699999999999999979--87899977769879999743425420

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Eukaryotic initiation factor 2alpha, eIF2alpha, N-terminal domain
species: Sulfolobus solfataricus [TaxId: 2287]