HHSEARCH alignment of GI: 254780751 and SCOP domain: d2ix0a3

Alignment

Probab=94.25  E-value=0.049  Score=30.07  Aligned_cols=40  Identities=13%  Similarity=0.156  Sum_probs=34.7

Q ss_pred             CCCEEEEEEEEECCCCCEEEEEEC-CCCCCCCCHHHCCCCCCC
Q ss_conf             287879899783638823135327-897713022213712102
Q gi|254780751|r   39 KGNIYLAKVTRVEPSLQAAFVDYG-GNRHGFLPFLEIHPDYYQ   80 (723)
Q Consensus        39 ~GnIY~G~V~~V~p~lqAAFVdiG-~~k~gFL~~~ei~~~y~~   80 (723)
                      .+..|-|.|+.|.+.  ..||.+- .+-.||+|+++++.|||.
T Consensus         3 ~~~~F~g~Is~v~~~--GifV~L~e~~~eGlI~~s~L~~d~y~   43 (87)
T d2ix0a3           3 TDTRFAAEIVDISRG--GMRVRLVDNGAIAFIPAPFLHAVRDE   43 (87)
T ss_dssp             SCCCEEEEEEEEETT--EEEEEETTTCCEEEEEGGGTCSCGGG
T ss_pred             CCCEEEEEEEEEECC--EEEEEEECCCCEEEEEEHHCCCCEEE
T ss_conf             898898999999857--09999935783999990447883299

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Exoribonuclease 2, RNB
species: Escherichia coli [TaxId: 562]