HHSEARCH alignment of GI: 254780751 and SCOP domain: d2je6i1

Alignment
>d2je6i1 b.40.4.5 (I:66-152) S1-domain of exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.86  E-value=1.5e-05  Score=54.50  Aligned_cols=40  Identities=20%  Similarity=0.171  Sum_probs=35.4

Q ss_pred             CCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCC
Q ss_conf             042878798997836388231353278977130222137121
Q gi|254780751|r   37 QIKGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLPFLEIHPDY   78 (723)
Q Consensus        37 ~~~GnIY~G~V~~V~p~lqAAFVdiG~~k~gFL~~~ei~~~y   78 (723)
                      ..+|+|+.|+|++|.+.  .||||||.+-.||||++|+.+++
T Consensus         5 Pk~Gdiv~G~V~~i~~~--g~fV~i~~~~~gll~~s~~~~~~   44 (87)
T d2je6i1           5 PKINDIVIGLVEDVEIY--GWVVDIKAPYKAYLPASNLLGRS   44 (87)
T ss_dssp             CCTTCEEEEEEEEECSS--EEEEECSSSSCEEEEHHHHHTSC
T ss_pred             CCCCCEEEEEEEEEECC--EEEEEECCCEEEEEEHHHHCCCE
T ss_conf             88999999999999898--89999489979998668937720


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: S1-domain of exosome complex RNA-binding protein 1, ECR1
species: Sulfolobus solfataricus [TaxId: 2287]