PSIBLAST alignment of GI: 254780751 and protein with PDB id: 2bx2
>gi|82408148|pdb|2BX2|L Chain L, Catalytic Domain Of E. Coli Rnase E Length = 517
>gi|82408201|pdb|2C0B|L Chain L, Catalytic Domain Of E. Coli Rnase E In Complex With 13-Mer Rna Length = 517
Score = 309 bits (790), Expect = 1e-81, Method: Composition-based stats.
Identities = 184/499 (36%), Positives = 281/499 (56%), Gaps = 8/499 (1%)
Query: 97 QTDSEAVADDVTHGDVTIPNDHSLEEVAPIANFSQETEEESIISANNDVVSNVE-----D 151
+ A+ D D+ I + ++ A I E S+ +A D +
Sbjct: 19 EELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLK 78
Query: 152 VKGGSPEDVPKKFKRQYCIQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMP 211
+ I++V++ Q ++VQI KEERGNKGAA+TT++SLAG Y VLMP
Sbjct: 79 EIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMP 138
Query: 212 NTSKGETISRKITNPVDRKNLKEIARGLEVPAGMGVILRTAGASRTKIEIKRDFEYLMRL 271
N + ISR+I + LKE LE+P GMG+I+RTAG ++ ++ D + ++
Sbjct: 139 NNPRAGGISRRIEGDDRTE-LKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKH 197
Query: 272 WDNVRELALNSVAPHLVYEEGNLIKRAIRDLYCKDISEIIVSGEKGYREAKDFMK-LLMP 330
W+ +++ A + AP L+++E N+I RA RD +DI EI++ K A+ + L P
Sbjct: 198 WEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRP 257
Query: 331 SYARIVRQYEDPHPIFFRSGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRST 390
++ ++ Y P+F IE Q++S Q EV LPS G ++I+ TEAL +ID+NS R+T
Sbjct: 258 DFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARAT 317
Query: 391 REHCIEDTALQTNLEAAEEIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKD 450
R IE+TA TNLEAA+EIARQLRLRDL GLIV+DFIDM ++ R+VE +L+E++++D
Sbjct: 318 RGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQD 377
Query: 451 RARVQVGAISNFGLLEMSRQRIRSSVLESTTKVCTYCKGAGYIRSQSSVALSILRSVEEY 510
RAR+Q+ IS FGLLEMSRQR+ S+ ES+ VC C G G +R S++LSILR +EE
Sbjct: 378 RARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEE 437
Query: 511 LLQYTAHNIIVHTHSDVVLYLLNQKRATIVEYEARF-GVSINVVIGIELADKLFYIEKGS 569
L+ + + YLLN+KR+ + E R GV +V ++ +++ +
Sbjct: 438 ALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVR 497
Query: 570 PVQALVNTGHKVGSDSQAP 588
+ + + +
Sbjct: 498 KGEETPTLSYMLPKLHEEA 516