RPSBLAST alignment for GI: 254780751 and conserved domain: PRK10811

>gnl|CDD|182751 PRK10811, rne, ribonuclease E; Reviewed. Length = 1068
 Score =  346 bits (890), Expect = 1e-95
 Identities = 179/388 (46%), Positives = 254/388 (65%), Gaps = 7/388 (1%)

Query: 170 IQEVIKNRQILLVQIVKEERGNKGAAVTTYLSLAGRYSVLMPNTSKGETISRKITNPVDR 229
           I++V++  Q ++VQI KEERGNKGAA+TT++SLAG Y VLMPN  +   ISR+I    DR
Sbjct: 90  IKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGD-DR 148

Query: 230 KNLKEIARGLEVPAGMGVILRTAGASRTKIEIKRDFEYLMRLWDNVRELALNSVAPHLVY 289
             LKE    LE+P GMG+I+RTAG  ++   ++ D  + ++ W+ +++ A +  AP L++
Sbjct: 149 TELKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIH 208

Query: 290 EEGNLIKRAIRDLYCKDISEIIVSGEKGYREAKDFMKLL-MPSYARIVRQYEDPHPIFFR 348
           +E N+I RA RD   +DI EI++   K    A+  +  L  P ++  ++ Y    P+F  
Sbjct: 209 QESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSH 268

Query: 349 SGIEVQLDSLHQTEVTLPSRGYVIINQTEALVSIDVNSGRSTREHCIEDTALQTNLEAAE 408
             IE Q++S  Q EV LPS G ++I+ TEAL +ID+NS R+TR   IE+TA  TNLEAA+
Sbjct: 269 YQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAAD 328

Query: 409 EIARQLRLRDLAGLIVVDFIDMEEKKNNRSVEKKLKESLKKDRARVQVGAISNFGLLEMS 468
           EIARQLRLRDL GLIV+DFIDM   ++ R+VE +L+E++++DRAR+Q+  IS FGLLEMS
Sbjct: 329 EIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMS 388

Query: 469 RQRIRSSVLESTTKVCTYCKGAGYIRSQSSVALSILRSVEEYLLQYTAHNIIVHTHSDVV 528
           RQR+  S+ ES+  VC  C G G +R   S++LSILR +EE  L+       VH    V 
Sbjct: 389 RQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQE--VHAIVPVP 446

Query: 529 L--YLLNQKRATIVEYEARFGVSINVVI 554
           +  YLLN+KR+ +   E R G  +  VI
Sbjct: 447 IASYLLNEKRSAVNAIETRQG-GVRCVI 473