HHsearch alignment for GI: 254780752 and conserved domain: COG5009
>COG5009 MrcA Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=1670.51 Aligned_cols=791 Identities=51% Similarity=0.833 Sum_probs=740.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCHHHH
Q ss_conf 99999999999999999999999999998704698978851247788779990789496666125604641799697888
Q gi|254780752|r 5 IVSFIGYFFGFATYSILGAILGASIYIAKISQNLPDYAALNSYSPAVTTRIHAGNGALMAEYARENRLFLPIQIIPSHVK 84 (817)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~l~~~~~~~~t~iyd~dG~~i~~~~~~~R~~v~~~~ip~~l~ 84 (817)
T Consensus 1 ~~r~i~~~l~i~~~~~l~g~~~~~~~~~~~~~dLPd~~~L~~~~p~~ptrvys~dG~Li~e~g~eRR~~vpi~~iP~~li 80 (797)
T COG5009 1 MMKLIKYLLGILVTLILLGAGALAGLYLYISPDLPDVETLKDVEPPVPTRVYSADGKLIAEYGEERRIPVPIDDIPDRLI 80 (797)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCEECCHHHCCHHHH
T ss_conf 92069999999999999999999999999731599868861127777438871588558987763243434687789999
Q ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCH
Q ss_conf 54543321461133873799999999998632047886776114799988887708883299999999999999866079
Q gi|254780752|r 85 YAFVSAEDKNFYYHSGVDIFGIMRAVLHNIRNISHGRRPEGASTITQQVAKNFLLTSNQTMDRKIKEILLSFRLEKAYDK 164 (817)
Q Consensus 85 ~A~iA~ED~rFy~H~GvD~~gi~RA~~~ni~~~~~g~~~qGgSTITQQlaKn~~l~~e~t~~RK~~E~~lA~~lE~~~sK 164 (817)
T Consensus 81 ~AflaaED~~FY~H~GvD~~GI~RAa~~nl~~---~~~~~GaSTITQQvAkNf~Ltsertl~RKikE~~LA~~IE~~lsK 157 (797)
T COG5009 81 NAFLAAEDKRFYEHHGVDPIGIFRAAFVNLTN---GGRSQGASTITQQVAKNFFLSSERTLERKIKEALLAIRIEQSLSK 157 (797)
T ss_pred HHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHC---CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 99987641351113896899999999999743---771677238999999885028136788899999999999976168
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999972014267433109999998735423440302712544401576433211111466789988876665420111
Q gi|254780752|r 165 EKILEFYLNEIFFGFNSYGIASAALTYFNKSVSELTIEEAAYLAALPKGPSNYDPFRKNKAAIARRNWVIDRMEENGYIS 244 (817)
Q Consensus 165 ~eILe~YLN~v~~G~~~yGv~aAA~~YF~K~~~dLtl~EaA~LAgi~~~Ps~y~P~~np~~a~~Rr~~VL~~M~~~g~It 244 (817)
T Consensus 158 deILELYLNkIylG~~aYGvaAAAq~YFgKsV~eLtlaE~A~lA~LPKaPs~ynP~~~p~RA~~RRn~VL~rM~e~gyIt 237 (797)
T COG5009 158 DEILELYLNKIYLGYRAYGVAAAAQTYFGKSVNELTLAEAAMLAGLPKAPSNYNPLYNPERAKERRNYVLNRMLEEGYIT 237 (797)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 88999987777506750568899998827775334499999985267896555975588999999999999998738987
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25688875301112445432223457156799885311001243312573289852488898999999998767654443
Q gi|254780752|r 245 QEQALVAKQKPLKITIKQRRSHLFGSEYFAEEVRRQLIDRYGEKALYEDGLSIRTSLDPQLQLYARKALQNGLINYDQND 324 (817)
Q Consensus 245 ~~e~~~a~~~~i~~~~~~~~~~~~~a~yf~e~V~~~l~~~~ge~~l~~~Gl~I~TTiD~~lQ~~Ae~ai~~~l~~~d~~~ 324 (817)
T Consensus 238 ~~~~~~A~~epl~~~-~~~~~~~~~A~YfaE~VRqe~~~~yge~a~Y~~G~~V~TTld~~~Q~~A~~alr~gL~~yd~rh 316 (797)
T COG5009 238 QEQADEAKAEPLVAK-YHGPEIAFSAPYFAEMVRQEMIRRYGEEAAYTGGYSVYTTLDLKLQKAAQKALRNGLLDYDRRH 316 (797)
T ss_pred HHHHHHHHCCCCCCC-CCCCCHHCCCHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999999852854234-4566221057689999999999983625552488469998588899999999999899999863
Q ss_pred HHHCCHHCCCCH-HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCC
Q ss_conf 210000001211-2488778633320133555410476521440267652033443100002444234888966520011
Q gi|254780752|r 325 GFRGPIKRIDLK-KDWGNTLASIPTLYDVPEWDIAVVLEVSNSHITIGIRPTIDSNGKVTTERKKGIIEADSMRWVYNKE 403 (817)
Q Consensus 325 g~rg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (817)
T Consensus 317 g~Rgp~~~i~~~~~~~~~~~~~~~~l~~~~~~~~AvV~~~~~~~a~i~~~~~~~-----------~~~~~~~m~wa~~~~ 385 (797)
T COG5009 317 GYRGPEAHIELSGEDWWDELAISDTLSDVGELLPAVVLSVAKSGAKIGLADGSK-----------VTLSMEAMRWARRLL 385 (797)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCC-----------CCCCHHHHHHHHHHC
T ss_conf 767864544655541054665422010366613889998536776698205640-----------134387754454303
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 2233321000013646310123566-515775225553116640656666117872132344433200123356653100
Q gi|254780752|r 404 QTTEETSENRNVLSLGDVIYVEHIN-EGWRLRQIPKVQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFK 482 (817)
Q Consensus 404 ~~~~~~~~~~~~l~~gd~i~i~~~~-~~~~l~~~p~~q~a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~K 482 (817)
T Consensus 386 ~~~~---~~~~~l~~G~~i~V~~~~~~~~~l~QiP~v~gAlVsmdp~tG~I~AlVGGfsf~~SkFNRATQA~rQPGSsfK 462 (797)
T COG5009 386 SDNK---SPEDVLKPGDVIYVRKNGGGGWRLRQIPEVNGALVSLDPKTGAILALVGGFSFAQSKFNRATQALRQPGSSFK 462 (797)
T ss_pred CCCC---CCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHH
T ss_conf 3556---7333468888899997788862513066555626997079870899863634322244477776417985212
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEECCCC--EEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 001278874024665445652378803785--266641276544225666666530440225887625972352110135
Q gi|254780752|r 483 PIVYAAALDSGYTPASVIMDAPIEVVSRGK--IWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENF 560 (817)
Q Consensus 483 P~vy~~Ale~G~tp~t~~~D~p~~~~~~~~--~~~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~ 560 (817)
T Consensus 463 PfvYsAALd~G~T~asvi~DaPi~~~~~~~~~~W~PkNy~gk~~Gp~~lR~gL~qSrNl~aVR~l~~vG~d~~~ey~~rf 542 (797)
T COG5009 463 PFVYSAALDKGLTPASVINDAPISFWDGGGGGVWRPKNYGGKFAGPITLRQGLEQSRNLVAVRLLDAVGVDYAAEYIKRF 542 (797)
T ss_pred HHHHHHHHHCCCCHHHEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 78999998649987670137884664699887527788898756733899999970128999999985759999999984
Q ss_pred CCC-CCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 565-5567665634451000037767432201574403544666764102443013358532355666666655455467
Q gi|254780752|r 561 GIY-DKMLPVLPMSLGAGETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEII 639 (817)
Q Consensus 561 Gi~-~~~~~~~s~alG~~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (817)
T Consensus 543 G~~~d~~~~~~smALGs~e~Tplqma~AYaVfaNGG~~VeP~~I~~I~Dr~Gkvif~~~p~~~~~~~~~~~~~~~~~~~~ 622 (797)
T COG5009 543 GFYTDELPPVLSMALGSGETTPLQMARAYAVFANGGKRVEPYFIDRIEDRNGKVIFRAEPRVCCRCNADEANNQEEQTLA 622 (797)
T ss_pred CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEEECCCCCEEEECCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 97745668541211143354289987667631069807564444536548886675358156544223322355554322
Q ss_pred CCCCEECCHHHHHHHHHHHHHHHHCCCEEHHCCCCCC-EEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCC
Q ss_conf 5543535899999999999998734804321059960-467604678970227984569879999982668982789864
Q gi|254780752|r 640 DKREQVLDPMTAYQITSMLEGVIKHGTATGKVRLNRP-VAGKTGTTSSYRDTWFIGYTPTLVVGVYVGYDIPAPLNNHAT 718 (817)
Q Consensus 640 ~~~~~v~s~~~a~~~~~~L~~vv~~GTg~~a~~~~~~-iaGKTGTt~~~~D~WfvG~tp~~~~~vWvG~D~~~~~~~~~~ 718 (817)
T Consensus 623 ~~~~qVid~~~ay~itsml~~vv~~GT~~~a~~L~r~DiAGKTGTTNd~kDAWfvGy~P~~Vt~vwvGfD~~rsLG~~~t 702 (797)
T COG5009 623 DYAPQVIDPMTAYQITSMLRGVVQRGTAARAGRLGRPDIAGKTGTTNDSKDAWFVGYTPDLVTGVWVGFDHPRSLGRGET 702 (797)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCC
T ss_conf 35240268337899999998888603377787439854366777778765526733689826899986689866767777
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 42121799999999997489830067977716998403227758899976089953178999865677776667776445
Q gi|254780752|r 719 GSTLTAPIFNAFMKEALKNIPSSRFVAPPGMSLIPINKWTGMLSKKGDPDTIIEAFKPGTGPAETYTVIDEDSNVSSEEI 798 (817)
Q Consensus 719 G~~~a~piw~~~m~~~~~~~p~~~f~~P~~iv~~~i~~~sG~la~~~~~~~~~e~f~~gt~P~~~~~~~~~~~~~~~~~~ 798 (817)
T Consensus 703 G~~~A~Piw~~fM~~alk~~P~~~f~~P~gi~~~~i~~~TG~~~~~g~~~~~~e~f~~gt~p~~~~~~~~~~~~~~~~~- 781 (797)
T COG5009 703 GGKLALPIWIDFMKVALKGKPEKDFVPPPGIVSINIDRKTGLLANEGAPKTIIEYFIPGTQPTETESVEGQRGFEIPDD- 781 (797)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 8775664699999999738986666799974388764556612689997651443057999875313356667778765-
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q ss_conf 6788877888889998879
Q gi|254780752|r 799 LRRSPQANQAINSGSGGLY 817 (817)
Q Consensus 799 ~~~~p~~~~~~~~~~gg~~ 817 (817)
T Consensus 782 --~~p~~-~~~~~~~~~lf 797 (797)
T COG5009 782 --DVPNA-NASNGQILELF 797 (797)
T ss_pred --CCCCC-CCCCCCCCCCC
T ss_conf --56554-56777666779