HHsearch alignment for GI: 254780752 and conserved domain: PRK11397
>PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional.
Probab=95.17 E-value=0.012 Score=36.46 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=77.2
Q ss_pred EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHCC-CCCCCCCCCCEEEEECCCCEEEEE
Q ss_conf 16640656666117872132344433200123356653100001278---87402-466544565237880378526664
Q gi|254780752|r 442 GLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAA---ALDSG-YTPASVIMDAPIEVVSRGKIWKPE 517 (817)
Q Consensus 442 a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~---Ale~G-~tp~t~~~D~p~~~~~~~~~~~p~ 517 (817)
T Consensus 40 sailiD~~TG~vLy~-------kN-----~d~~~~pAS~TKlMT~~v~~e~i~~g~l~~d~~v~vs~~a~~~~~~~~~-- 105 (390)
T PRK11397 40 SWVLMDYTTGQILTA-------GN-----EHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFV-- 105 (390)
T ss_pred EEEEEECCCCCEEEE-------EC-----CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCC--
T ss_conf 999999999969201-------29-----2998487799999999999999973999978659963878741487657--
Q ss_pred ECCC---CCCCHHHHHH----HHHHHCCHHHHHHHHHCCCC--E----EEEEECCCCCCCCCCCCCCCCCCC--CEEHHH
Q ss_conf 1276---5442256666----66530440225887625972--3----521101355655567665634451--000037
Q gi|254780752|r 518 NYSK---NFSGASTLRF----GLEKSRNLMTVRLAHNMGMT--V----VADYAENFGIYDKMLPVLPMSLGA--GETTVL 582 (817)
Q Consensus 518 N~~~---~~~G~itl~~----Al~~S~N~~~v~l~~~~G~~--~----~~~~~~~~Gi~~~~~~~~s~alG~--~~vtpl 582 (817)
T Consensus 106 g~s~~~l~~Ge~~tv~dLl~~lli~SaNDAa~aLAe~i~Gs~~~Fv~~MN~kAk~lG~~nT~F~n-p~GL~~~~~~tTA~ 184 (390)
T PRK11397 106 GSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYVEKLHLKDTHFET-VHGLDAPGQHSSAY 184 (390)
T ss_pred CCCEEECCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEC-CCCCCCCCCCCCHH
T ss_conf 87224215898999999999988744239999999752799999999999999985898746854-43467888888999
Q ss_pred HHHHHHHHCC
Q ss_conf 7674322015
Q gi|254780752|r 583 RMVSAYAVFA 592 (817)
Q Consensus 583 ~la~aya~~A 592 (817)
T Consensus 185 Dla~la~~~i 194 (390)
T PRK11397 185 DLAVLSRAII 194 (390)
T ss_pred HHHHHHHHHH
T ss_conf 9999999974