HHsearch alignment for GI: 254780752 and conserved domain: PRK12356

Probab=94.08  E-value=0.19  Score=28.44  Aligned_cols=103  Identities=17%  Similarity=0.241  Sum_probs=66.7

Q ss_pred             CCEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHH
Q ss_conf             10000377674322015744035446667641024430133585323556666666554554675543535899999999
Q gi|254780752|r  576 AGETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQIT  655 (817)
Q Consensus       576 ~~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~  655 (817)
T Consensus       200 Si~vt~~dLA~~~atLAn~G~~--P~---------------------------------------tg~~v~~~~~~r~v~  238 (319)
T PRK12356        200 STLVTARDLATMGATLAAGGVN--PL---------------------------------------TGKRVVDADNVPYIL  238 (319)
T ss_pred             CCCEEHHHHHHHHHHHHCCCCC--CC---------------------------------------CCCCCCCHHHHHHHH
T ss_conf             7420299999999999758968--99---------------------------------------889538889999999


Q ss_pred             HHHHHHHH-CCCEEHHCCCCCCEEEEECCCCCCCCEEEEEECC-CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99999873-4804321059960467604678970227984569-879999982668982789864421217999999999
Q gi|254780752|r  656 SMLEGVIK-HGTATGKVRLNRPVAGKTGTTSSYRDTWFIGYTP-TLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKE  733 (817)
Q Consensus       656 ~~L~~vv~-~GTg~~a~~~~~~iaGKTGTt~~~~D~WfvG~tp-~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~  733 (817)
T Consensus       239 s~M~tcGmYD~SG~fa~~VG--lPaKSGVgG-----gIlavvPg~~gIav~S----P-~--LD~~GNSvrG~~~le~Ls~  304 (319)
T PRK12356        239 AEMTMEGLYERSGDWAYTVG--LPGKSGVGG-----GILAVVPGKMGIAAFS----P-P--LDEAGNSVKGQLAVASVAR  304 (319)
T ss_pred             HHHHHCCCCCCCCCHHHEEC--CCCCCCCCC-----EEEEEECCCCEEEEEC----C-C--CCCCCCCHHHHHHHHHHHH
T ss_conf             99986688535121020377--702357665-----3799937961799988----8-8--7888886999999999999