HHsearch alignment for GI: 254780752 and conserved domain: TIGR02071
>TIGR02071 PBP_1b penicillin-binding protein 1B; InterPro: IPR011813 Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in Escherichia coli and other Proteobacteria, designated penicillin-binding protein 1B.; GO: 0008233 peptidase activity, 0008955 peptidoglycan glycosyltransferase activity, 0009252 peptidoglycan biosynthetic process, 0046677 response to antibiotic, 0009274 peptidoglycan-based cell wall.
Probab=100.00 E-value=0 Score=1162.39 Aligned_cols=576 Identities=31% Similarity=0.520 Sum_probs=535.9
Q ss_pred CCCEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHH--HHHCCCCC
Q ss_conf 25604641799697888545433214611338737999999999986320478867-7611479998888--77088832
Q gi|254780752|r 68 RENRLFLPIQIIPSHVKYAFVSAEDKNFYYHSGVDIFGIMRAVLHNIRNISHGRRP-EGASTITQQVAKN--FLLTSNQT 144 (817)
Q Consensus 68 ~~~R~~v~~~~ip~~l~~A~iA~ED~rFy~H~GvD~~gi~RA~~~ni~~~~~g~~~-qGgSTITQQlaKn--~~l~~e~t 144 (817)
T Consensus 144 ~E~Rl~v~r~~~P~lLvdtLl~~EDR~Fy~HdGi~~~SI~RA~~vNl~---AG~tvrQGGSTLTQQLvKNGlLFLs~eRs 220 (742)
T TIGR02071 144 GEQRLFVPRDQFPELLVDTLLATEDRDFYEHDGISLYSIGRAVLVNLT---AGRTVRQGGSTLTQQLVKNGLLFLSNERS 220 (742)
T ss_pred CCCEEEECCCCCCHHHEECEEEEECCCCCCCCCCCHHHHHHHHHHHHH---CCCCEEECCCHHHHHHHHHHHCCCCCHHH
T ss_conf 543234001048411100115575102455587458799999999874---38826507402689999840002575147
Q ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC----CCCHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCCC
Q ss_conf 999999999999998660799999997201426743----3109999998735423440302712544401576433211
Q gi|254780752|r 145 MDRKIKEILLSFRLEKAYDKEKILEFYLNEIFFGFN----SYGIASAALTYFNKSVSELTIEEAAYLAALPKGPSNYDPF 220 (817)
Q Consensus 145 ~~RK~~E~~lA~~lE~~~sK~eILe~YLN~v~~G~~----~yGv~aAA~~YF~K~~~dLtl~EaA~LAgi~~~Ps~y~P~ 220 (817)
T Consensus 221 l~RK~NEa~MALild~rYsKdrILE~YLNEVYLGQ~G~~~IhGF~LAS~yyFGrpl~EL~ldQ~ALLVGMVKGpS~YnP~ 300 (742)
T TIGR02071 221 LWRKINEAYMALILDARYSKDRILELYLNEVYLGQSGDDAIHGFPLASQYYFGRPLAELSLDQVALLVGMVKGPSLYNPW 300 (742)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 88999999999998513682278887532300076756521330334432237740010077787874211267778735
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCC-CCCCHHHHHHHHHHHHHCCCHH-HHCCCCEEE
Q ss_conf 1114667899888766654201112568887530111244543-222-3457156799885311001243-312573289
Q gi|254780752|r 221 RKNKAAIARRNWVIDRMEENGYISQEQALVAKQKPLKITIKQR-RSH-LFGSEYFAEEVRRQLIDRYGEK-ALYEDGLSI 297 (817)
Q Consensus 221 ~np~~a~~Rr~~VL~~M~~~g~It~~e~~~a~~~~i~~~~~~~-~~~-~~~a~yf~e~V~~~l~~~~ge~-~l~~~Gl~I 297 (817)
T Consensus 301 RnP~~AL~RRNLVL~lL~e~~~i~~~~Y~~l~~RpLgVqk~g~l~~sn~~--PAF~qlV~~eL~~kl~~~k~~~~~G~~i 378 (742)
T TIGR02071 301 RNPDRALERRNLVLRLLQEQKIITDEEYQALSARPLGVQKKGGLIISNRY--PAFLQLVRRELRQKLGDKKVKDLSGLRI 378 (742)
T ss_pred CCHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECCCC--CCHHHHHHHHHHHHCCCCCCCCCCCCEE
T ss_conf 10688875214789999744744778999997277988899866632788--5389999999997637755454578778
Q ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCC
Q ss_conf 85248889899999999876765444321000000121124887786333201335554104765214402676520334
Q gi|254780752|r 298 RTSLDPQLQLYARKALQNGLINYDQNDGFRGPIKRIDLKKDWGNTLASIPTLYDVPEWDIAVVLEVSNSHITIGIRPTID 377 (817)
Q Consensus 298 ~TTiD~~lQ~~Ae~ai~~~l~~~d~~~g~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 377 (817)
T Consensus 379 FTtlD~~~Q~~aE~av~~~~~~L~~~kG~~-------------------------------------------------- 408 (742)
T TIGR02071 379 FTTLDPVSQSAAEQAVKETIPALKKKKGKK-------------------------------------------------- 408 (742)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHCCCC--------------------------------------------------
T ss_conf 843797899999987876457888750678--------------------------------------------------
Q ss_pred CCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEE
Q ss_conf 43100002444234888966520011223332100001364631012356651577522555311664065666611787
Q gi|254780752|r 378 SNGKVTTERKKGIIEADSMRWVYNKEQTTEETSENRNVLSLGDVIYVEHINEGWRLRQIPKVQGGLIAMDPRTGRILATI 457 (817)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~i~~~~~~~~l~~~p~~q~a~V~id~~TG~IlA~v 457 (817)
T Consensus 409 ----------------------------------------------------------~~~LEaAmvv~D~~~GEvrA~v 430 (742)
T TIGR02071 409 ----------------------------------------------------------LKDLEAAMVVVDRFTGEVRALV 430 (742)
T ss_pred ----------------------------------------------------------CCCCEEEEEEEECCCCEEEEEE
T ss_conf ----------------------------------------------------------8853177889836887078887
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCCCCCCCCEEEEECC-CCEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 21323444332001233566531000012788740--246654456523788037-852666412765442256666665
Q gi|254780752|r 458 GGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALDS--GYTPASVIMDAPIEVVSR-GKIWKPENYSKNFSGASTLRFGLE 534 (817)
Q Consensus 458 Gg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale~--G~tp~t~~~D~p~~~~~~-~~~~~p~N~~~~~~G~itl~~Al~ 534 (817)
T Consensus 431 Gg~~p~f~GFNRAl~A~R~iGSL~KP~vYLtALs~P~~Y~LnTw~~d~P~~ik~~~G~~W~P~N~D~~~~g~V~L~dALa 510 (742)
T TIGR02071 431 GGRDPQFAGFNRALQARRQIGSLVKPAVYLTALSQPDKYRLNTWIEDQPLSIKLSNGQVWSPRNYDRRYSGTVMLYDALA 510 (742)
T ss_pred CCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEHHHHHH
T ss_conf 58788756010364163776432436899997278973114664236644775688872465147742256264678987
Q ss_pred HHCCHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCC
Q ss_conf 3044022588762597235211013556555-676656344510000377674322015744035446667641024430
Q gi|254780752|r 535 KSRNLMTVRLAHNMGMTVVADYAENFGIYDK-MLPVLPMSLGAGETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKT 613 (817)
Q Consensus 535 ~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~-~~~~~s~alG~~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~v 613 (817)
T Consensus 511 ~S~N~pTV~lGm~vGl~~V~~t~~~LG~~k~~i~~~PsmlLGA~~ltP~evaq~YQtlAsgG~~~pL~avRSVl~~dG~v 590 (742)
T TIGR02071 511 RSLNIPTVNLGMKVGLDKVSQTLKKLGINKDEIPPVPSMLLGAISLTPYEVAQLYQTLASGGERAPLSAVRSVLDEDGKV 590 (742)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCE
T ss_conf 65317678864631767899999982877120476633552113668789998997762577554310220101147763
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHH--HHHHHHHHHHHHHHCCCEEHHC--CC-CCCEEEEECCCCCCC
Q ss_conf 133585323556666666554554675543535899--9999999999987348043210--59-960467604678970
Q gi|254780752|r 614 IFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPM--TAYQITSMLEGVIKHGTATGKV--RL-NRPVAGKTGTTSSYR 688 (817)
Q Consensus 614 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~--~a~~~~~~L~~vv~~GTg~~a~--~~-~~~iaGKTGTt~~~~ 688 (817)
T Consensus 591 Ly~~~~---------------------~~~~~~p~~svAaylt~~AMQqvV~~GTaRsL~~~~~~~l~LAGKTGTtNd~R 649 (742)
T TIGR02071 591 LYQSLP---------------------QAEQAVPSQSVAAYLTLYAMQQVVQRGTARSLGADFPSSLSLAGKTGTTNDSR 649 (742)
T ss_pred EECCCC---------------------CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 301788---------------------74545774203577677787754201201100100466656545636568885
Q ss_pred CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHCCCCCCC-CC
Q ss_conf 22798456987999998266898278986442121799999999997489830067977716998403227758899-97
Q gi|254780752|r 689 DTWFIGYTPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIPSSRFVAPPGMSLIPINKWTGMLSKKG-DP 767 (817)
Q Consensus 689 D~WfvG~tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~~~~~p~~~f~~P~~iv~~~i~~~sG~la~~~-~~ 767 (817)
T Consensus 650 DsWF~G~dG~~~~~~W~GRD~N~~T--kLtGAsGAl~vy~~yL~~~--~P~~L~l~~P~~i~~~~v~~~G~~~~~~~nC~ 725 (742)
T TIGR02071 650 DSWFVGIDGKEVTIVWLGRDDNGPT--KLTGASGALQVYKRYLKYQ--TPEPLLLVPPEGIKMFGVDKQGNGGCKADNCP 725 (742)
T ss_pred CEEEEEECCCEEEEEEEECCCCCCC--CCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 1047764387899999852789884--7645315899999998525--88742336878833677744777302246899
Q ss_pred CEEEEEECCCCCCC
Q ss_conf 60899531789998
Q gi|254780752|r 768 DTIIEAFKPGTGPA 781 (817)
Q Consensus 768 ~~~~e~f~~gt~P~ 781 (817)
T Consensus 726 ~~r~lP~w~~~~~~ 739 (742)
T TIGR02071 726 GARRLPIWTGNEQA 739 (742)
T ss_pred CCEEEEEECCCCCC
T ss_conf 84484267078766