HHsearch alignment for GI: 254780752 and conserved domain: TIGR02214

>TIGR02214 spoVD_pbp stage V sporulation protein D; InterPro: IPR011927 This entry describes the SpoVD family of homologs of the cell division protein FtsI, a penicillin binding protein. This family is restricted to Bacillus subtilis and related Gram-positive species with known or suspected endospore formation capability. In these species, the functional equivalent of FtsI is desginated PBP-2B, a paralog of SpoVD..
Probab=100.00  E-value=0  Score=370.43  Aligned_cols=271  Identities=27%  Similarity=0.408  Sum_probs=229.2

Q ss_pred             CEEEEECCCCCCCEEEEECCCCCCCCC---------------------CCCCCCCCCCCCCCHHHHHHHHHHCCC-C-CC
Q ss_conf             116640656666117872132344433---------------------200123356653100001278874024-6-65
Q gi|254780752|r  441 GGLIAMDPRTGRILATIGGFSYSQSEF---------------------NRSTQAMRQPGSCFKPIVYAAALDSGY-T-PA  497 (817)
Q Consensus       441 ~a~V~id~~TG~IlA~vGg~d~~~~~~---------------------NrA~~~~rqpGSt~KP~vy~~Ale~G~-t-p~  497 (817)
T Consensus       249 ~~i~vMnpknGeILGM~nrP~ydpn~p~~~s~~~~~kdesa~LQ~~WRN~~v~d~yEPGS~FKiiT~~AA~~eg~v~le~  328 (660)
T TIGR02214       249 VSIIVMNPKNGEILGMSNRPSYDPNDPRDKSPEVKRKDESAKLQKSWRNRVVSDAYEPGSIFKIITSSAAMEEGIVKLEK  328 (660)
T ss_pred             EEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCEECCC
T ss_conf             89999769997176520678878777430374360542036886501885011221698477999999997327400036


Q ss_pred             CCCCC-CEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC------
Q ss_conf             44565-23788037852666412765442256666665304402258876259723521101355655567665------
Q gi|254780752|r  498 SVIMD-APIEVVSRGKIWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKMLPVL------  570 (817)
Q Consensus       498 t~~~D-~p~~~~~~~~~~~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~~~~~------  570 (817)
T Consensus       329 d~FYd~G~~~vg--~~--~~kCWK~~GHG~qtF~~vv~NSCN~GF~elG~~LG~~~L~~Yi~~FGFG~~tGIdL~GEA~G  404 (660)
T TIGR02214       329 DKFYDDGSATVG--GK--KIKCWKPGGHGSQTFLEVVQNSCNVGFIELGERLGAEKLNEYIKKFGFGSKTGIDLPGEAAG  404 (660)
T ss_pred             CEEECCCEEEEC--CC--EEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf             501078414434--82--66767688695546478753277778998855407668999998428987688666774103


Q ss_pred             --------------CCCCCCC-EEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCC---CC-CCCCCCCCCCCCCCCCC
Q ss_conf             --------------6344510-00037767432201574403544666764102443---01-33585323556666666
Q gi|254780752|r  571 --------------PMSLGAG-ETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGK---TI-FNQEQRICDDCNYDTWN  631 (817)
Q Consensus       571 --------------s~alG~~-~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~---vi-~~~~~~~~~~~~~~~~~  631 (817)
T Consensus       405 Il~n~~~v~pvdlAT~SfGQ~n~v~~iQ~~~A~~AvaNGG~L~~P~i~~e~~d~~~NG~~~v~~~f~P~-----------  473 (660)
T TIGR02214       405 ILKNLEKVGPVDLATISFGQANTVTPIQLMTAVNAVANGGKLIQPHIMKEISDKENNGRKVVDKKFEPE-----------  473 (660)
T ss_pred             EEECCCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCC-----------
T ss_conf             341376556122543310520004778999999987516656613312202175789515887530770-----------


Q ss_pred             CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEHHCCCCCCEEEEECCCCCC-----------CCEEEEEECC---
Q ss_conf             55455467554353589999999999999873480432105996046760467897-----------0227984569---
Q gi|254780752|r  632 GQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTATGKVRLNRPVAGKTGTTSSY-----------RDTWFIGYTP---  697 (817)
Q Consensus       632 ~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~GTg~~a~~~~~~iaGKTGTt~~~-----------~D~WfvG~tp---  697 (817)
T Consensus       474 ---------~~~~vv~~~~~~~l~~~LE~vVs~GsGk~AfIdGyrvGGKTGTAqKv~P~~G~Y~~g~YivSFvG~APa~d  544 (660)
T TIGR02214       474 ---------VKRKVVDKETTEKLRLALEKVVSKGSGKDAFIDGYRVGGKTGTAQKVKPEDGGYLEGEYIVSFVGFAPADD  544 (660)
T ss_pred             ---------EEEEECCHHHHHHHHHHHHCEEECCCCCCCCCCCEEECCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
T ss_conf             ---------12353267789999886411451477756110346957730453444788893414866899864278898


Q ss_pred             -CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             -879999982668982789864421217999999999974898
Q gi|254780752|r  698 -TLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIP  739 (817)
Q Consensus       698 -~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~~~~~p  739 (817)
T Consensus       545 P~v~~~V~v--D~P~~--~~~FGG~vAAPv~~~v~~d~l~~lG  583 (660)
T TIGR02214       545 PEVAVLVVV--DNPKG--VEQFGGLVAAPVVGEVFNDILNYLG  583 (660)
T ss_pred             CCEEEEEEE--ECCCC--CCCCCCEEECHHHHHHHHHHHHHCC
T ss_conf             847999998--67989--7201344874146889998887557