HHsearch results for GI: 254780752 and protein with PDBid: 1k55_A
>1k55_A Beta lactamase OXA-10; antibiotic resistance, carbamylation, hydrolase; HET: KCX SO4; 1.39A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1e4d_A* 1ewz_A 1k54_A* 1e3u_A* 1k56_A* 1k57_A* 3lce_A* 1k4f_A* 1k4e_A* 1k6r_A* 1k6s_A* 2wgv_A* 2wgw_A* 1fof_A 1e3u_D 2hpb_A 2hp9_A 2hp6_A 2wgi_A* 2rl3_A* ...
Probab=100.00 E-value=1.6e-41 Score=293.16 Aligned_cols=212 Identities=17% Similarity=0.186 Sum_probs=166.0
Q ss_pred CCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCEEEEECCCCEEEE
Q ss_conf 553116640656666117872132344433200123356653100001278874024-6654456523788037852666
Q gi|254780752|r 438 KVQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALDSGY-TPASVIMDAPIEVVSRGKIWKP 516 (817)
Q Consensus 438 ~~q~a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale~G~-tp~t~~~D~p~~~~~~~~~~~p 516 (817)
.++|++|+|||+||++++ +++|||+++ ++||||||||++++|||+|+ +|.+.+.+ .+ +..
T Consensus 16 ~~~G~~v~~d~~tg~~~~---------~~~~ra~~~-~~PGStfKp~~~~aaLe~G~i~~~~~~~~-----~~-g~~--- 76 (246)
T 1k55_A 16 AVNGVFVLCKSSSKSCAT---------NDLARASKE-YLPASTFKIPNAIIGLETGVIKNEHQVFK-----WD-GKP--- 76 (246)
T ss_dssp TCCEEEEEEESSTTSEEE---------SCHHHHTCC-BCCGGGGHHHHHHHHHHTTSSCSTTCEEC-----CC-SCC---
T ss_pred CCCEEEEEEECCCCCEEE---------ECHHHHHCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCC-----CC-CCC---
T ss_conf 783589999899996886---------376676268-79974389999999998089997445536-----89-956---
Q ss_pred EECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC---CCCCCCCCCEEHHHHHHHHHHHCCC
Q ss_conf 4127654422566666653044022588762597235211013556555676---6563445100003776743220157
Q gi|254780752|r 517 ENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKMLP---VLPMSLGAGETTVLRMVSAYAVFAN 593 (817)
Q Consensus 517 ~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~~~---~~s~alG~~~vtpl~la~aya~~AN 593 (817)
++.+.++|.++|++||++|||++++++++++|++++.+++++|||.....+ ..+...|...+||+||+++|++|||
T Consensus 77 -~~~~~~~g~~tl~~Al~~S~N~~~~~l~~~lG~~~~~~~~~~~G~g~~~~~~~~~~~~~~g~~~iTPlq~a~~~~~ian 155 (246)
T 1k55_A 77 -RAMKQWERDLTLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSYGNQNISGGIDKFWLEGQLRISAVNQVEFLESLYL 155 (246)
T ss_dssp -CSSGGGSSCEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHTTCTTCCCCSCTTTTTTTSSCCBCHHHHHHHHHHHHT
T ss_pred -CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHC
T ss_conf -6767779997999999974829999999983989999999983999887888765344469865569999999999972
Q ss_pred CCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEHHCCC
Q ss_conf 44035446667641024430133585323556666666554554675543535899999999999998734804321059
Q gi|254780752|r 594 GGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTATGKVRL 673 (817)
Q Consensus 594 ~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~GTg~~a~~~ 673 (817)
+|.. ++|+++..+.+||+.++. .
T Consensus 156 gg~~------------------------------------------------~sp~~~~~~~~~m~~~~~---------~ 178 (246)
T 1k55_A 156 NKLS------------------------------------------------ASKENQLIVKEALVTEAA---------P 178 (246)
T ss_dssp TCSS------------------------------------------------SCHHHHHHHHHHTEEEEE---------T
T ss_pred CCCC------------------------------------------------CCHHHHHHHHHHHHHHHH---------H
T ss_conf 9987------------------------------------------------788999999999998776---------6
Q ss_pred CCCEEEEECCC-----CCCCCEEEEEE----CCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 96046760467-----89702279845----69879999982668982789864421217999999999
Q gi|254780752|r 674 NRPVAGKTGTT-----SSYRDTWFIGY----TPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKE 733 (817)
Q Consensus 674 ~~~iaGKTGTt-----~~~~D~WfvG~----tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~ 733 (817)
+..++|||||+ ++..|+||||| .|.|+++|++..++ ..++..+++|.+++|+.
T Consensus 179 g~~vagKTGTa~~g~~~~~~~aWFvGf~p~~~p~~~~av~i~~~~-------~~~~~~a~~i~~~il~~ 240 (246)
T 1k55_A 179 EYLVHSKTGFSGVGTESNPGVAWWVGWVEKETEVYFFAFNMDIDN-------ESKLPLRKSIPTKIMES 240 (246)
T ss_dssp TEEEEEEEEECCCCCSSSCEEEEEEEEEEETTEEEEEEEEEEESC-------GGGTTHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCC-------CCCCHHHHHHHHHHHHH
T ss_conf 422144451222057899853899999987998599999997799-------88758899999999997