HHsearch results for GI: 254780752 and protein with PDBid: 2v2f_F
>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=100.00 E-value=0 Score=608.66 Aligned_cols=355 Identities=22% Similarity=0.325 Sum_probs=306.3
Q ss_pred CCHHHHHHHHHHHHHCCCHH---HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHH
Q ss_conf 57156799885311001243---312573289852488898999999998767654443210000001211248877863
Q gi|254780752|r 269 GSEYFAEEVRRQLIDRYGEK---ALYEDGLSIRTSLDPQLQLYARKALQNGLINYDQNDGFRGPIKRIDLKKDWGNTLAS 345 (817)
Q Consensus 269 ~a~yf~e~V~~~l~~~~ge~---~l~~~Gl~I~TTiD~~lQ~~Ae~ai~~~l~~~d~~~g~rg~~~~~~~~~~~~~~~~~ 345 (817)
..|||+|+|++|+++++.++ +++++|++||||||.++|+++|+++++......
T Consensus 4 ~yp~y~d~v~~e~i~~~~~~~~~~l~~~G~~I~tTiD~~~Q~~~e~~l~~~~~~~~------------------------ 59 (390)
T 2v2f_F 4 NYPAYMDNYLKEVINQVEQETGYNLLTTGMDVYTNVDQEAQKHLWDIYNSDQYVSY------------------------ 59 (390)
T ss_dssp -CCGGGHHHHHHHHHHHHHHHSCCTTTSCEEEEECCCHHHHHHHHHHHHSSSSCCC------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCC------------------------
T ss_conf 56299999999999988776412644699889947889999999999975344216------------------------
Q ss_pred HHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33201335554104765214402676520334431000024442348889665200112233321000013646310123
Q gi|254780752|r 346 IPTLYDVPEWDIAVVLEVSNSHITIGIRPTIDSNGKVTTERKKGIIEADSMRWVYNKEQTTEETSENRNVLSLGDVIYVE 425 (817)
Q Consensus 346 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~i~ 425 (817)
T Consensus 60 -------------------------------------------------------------------------------- 59 (390)
T 2v2f_F 60 -------------------------------------------------------------------------------- 59 (390)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCCCC---CCCCCCCCCCCCCCCCHHHH-HHHHHHCCC-CC-CCC
Q ss_conf 5665157752255531166406566661178721323444---33200123356653100001-278874024-66-544
Q gi|254780752|r 426 HINEGWRLRQIPKVQGGLIAMDPRTGRILATIGGFSYSQS---EFNRSTQAMRQPGSCFKPIV-YAAALDSGY-TP-ASV 499 (817)
Q Consensus 426 ~~~~~~~l~~~p~~q~a~V~id~~TG~IlA~vGg~d~~~~---~~NrA~~~~rqpGSt~KP~v-y~~Ale~G~-tp-~t~ 499 (817)
....+|+|+|+|||+||+||||+|+++|..+ .+|||+++.||||||||||+ |++|||+|+ .+ .++
T Consensus 60 ---------~~~~~~~a~vv~d~~TG~IlA~vg~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~~aaale~g~~~~~~~~ 130 (390)
T 2v2f_F 60 ---------PDDDLQVASTVVDVSNGKVIAQLGARHQASNVSFGTNQAVETNRDWGSAMKPITDYAPAIEYGVYDSTATM 130 (390)
T ss_dssp ---------SSSCCEEEEEEEETTTTEEEEEECCCC-----CCCCCTTTCCCSCCGGGGHHHHTHHHHHHTTSCSBTTCE
T ss_pred ---------CCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEE
T ss_conf ---------78770489999988999499999678777676556432220566887417799999999976986664057
Q ss_pred CCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCC-------CCCCCC
Q ss_conf 5652378803785266641276544225666666530440225887625972352110135565556-------766563
Q gi|254780752|r 500 IMDAPIEVVSRGKIWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIYDKM-------LPVLPM 572 (817)
Q Consensus 500 ~~D~p~~~~~~~~~~~p~N~~~~~~G~itl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~~~~-------~~~~s~ 572 (817)
+.|.|+.+.. ..|.++||++.++|.+++++||++|||++|+++++++|.+++.+++++|||..+. ....++
T Consensus 131 ~~~~~~~~~~--~~~~~~n~~~~~~G~vtl~~Al~~S~N~~~~~l~~~~G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 208 (390)
T 2v2f_F 131 VNDIPYNYPG--TSTPVYNWDRAYFGNITLQYALQQSRNVTAVETLNKVGLDRAKTFLNGLGIDYPSMHYANAISSNTTE 208 (390)
T ss_dssp EEESCEECTT--SSCEECCTTSCCCEEEEHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHTTTCCCSSCCGGGGSCSCSSC
T ss_pred ECCCCCCCCC--CCCCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
T ss_conf 5267610157--99874307998577422999998633037889987539278999999829998764444222321110
Q ss_pred CCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHH
Q ss_conf 44510000377674322015744035446667641024430133585323556666666554554675543535899999
Q gi|254780752|r 573 SLGAGETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAY 652 (817)
Q Consensus 573 alG~~~vtpl~la~aya~~AN~G~~~~P~~i~kI~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~ 652 (817)
++|..++||+|||++|++|||+|++++||+|++|+|.+|+++.. . +...||+|+++|+
T Consensus 209 ~~g~~~vtplqma~ayaaiaN~G~~~~P~~v~~i~d~~g~~~~~-~---------------------~~~~~v~~~~~a~ 266 (390)
T 2v2f_F 209 SNKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEF-S---------------------DVGTRAMKETTAY 266 (390)
T ss_dssp CCTTSSCCHHHHHHHHHHHHTTSEECCCBCEEEEEETTSCEEEC-C---------------------CCCEECSCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCCEEC-C---------------------CCCCCCCCHHHHH
T ss_conf 58640458999999999986498670678877798548860022-5---------------------6443455389999
Q ss_pred HHHHHHHHHHHCCCEEHHCCCCCCEEEEECCCCCC---------------CCEEEEEECCCEEEEEEEECCCCCCCCCCC
Q ss_conf 99999999873480432105996046760467897---------------022798456987999998266898278986
Q gi|254780752|r 653 QITSMLEGVIKHGTATGKVRLNRPVAGKTGTTSSY---------------RDTWFIGYTPTLVVGVYVGYDIPAPLNNHA 717 (817)
Q Consensus 653 ~~~~~L~~vv~~GTg~~a~~~~~~iaGKTGTt~~~---------------~D~WfvG~tp~~~~~vWvG~D~~~~~~~~~ 717 (817)
++++||+.||+.|||+++...++++||||||+|++ +|+||+||+|+|+++||||+|++... ..+
T Consensus 267 ~~~~~l~~vv~~GT~~~a~~~~~~vaGKTGTaq~~~~~~~~~~~~~~~~~~d~wfvG~~P~~~~~VwvG~~~~~~~-~~~ 345 (390)
T 2v2f_F 267 MMTEMMKTVLAYGTGRGAYLPWLAQAGKTGTSNYTDDEIEKHIKNTGYVAPDEMFVGYTRKYSMAVWTGYSNRLTP-IVG 345 (390)
T ss_dssp HHHHHHHHHHHTSTTGGGCCTTSCCEEEEEECCCCC-----------CCBSEEEEEEECSSEEEEEEEECSSTTSC-BCG
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCC-CCC
T ss_conf 9999876460267631102799707898147667777653334556777664699997899799999941799888-688
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEE-EECHHHCCC
Q ss_conf 44212179999999999748983006797771699-840322775
Q gi|254780752|r 718 TGSTLTAPIFNAFMKEALKNIPSSRFVAPPGMSLI-PINKWTGML 761 (817)
Q Consensus 718 ~G~~~a~piw~~~m~~~~~~~p~~~f~~P~~iv~~-~i~~~sG~l 761 (817)
+|++.|+|||++||+.++++.+.++|+.|+||++. .+|..+|++
T Consensus 346 ~G~~~aapi~~~i~~~~~~~~~~~~f~~P~gv~~~~~~~~~~g~~ 390 (390)
T 2v2f_F 346 DGFLVAAKVYRSMITYLSEGSNPEDWNIPEGLYRNGEFVFKNGAR 390 (390)
T ss_dssp GGGGHHHHHHHHHHHHHHTTC-CCCCCCCTTEEEETTEEEEC---
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf 732799999999999996369977799999815803799716879