HHsearch results for GI: 254780752 and protein with PDBid: 3a3j_A
>3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae}
Probab=95.05 E-value=0.008 Score=36.15 Aligned_cols=131 Identities=18% Similarity=0.185 Sum_probs=72.4
Q ss_pred EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH---HHHCC-CCCCCCCC--CCEEEEECCCCEEE
Q ss_conf 16640656666117872132344433200123356653100001278---87402-46654456--52378803785266
Q gi|254780752|r 442 GLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAA---ALDSG-YTPASVIM--DAPIEVVSRGKIWK 515 (817)
Q Consensus 442 a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~---Ale~G-~tp~t~~~--D~p~~~~~~~~~~~ 515 (817)
+.++||..||+||.=- + .+.+++|.|+-|.++... +|++| +++.+.+. +........++.
T Consensus 11 saiv~d~~tG~iL~~k-------n-----~~~~~~pASlTKlMTa~v~l~~i~~g~l~~~~~vtvs~~~~~~~~~~~s-- 76 (344)
T 3a3j_A 11 TYVLMDYNSGAILTAL-------N-----PDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGRNFPDSS-- 76 (344)
T ss_dssp EEEEEETTTCCEEEEE-------S-----TTSCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCTTTCGGGCTTSC--
T ss_pred EEEEEECCCCCEEHEE-------C-----CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCC--
T ss_conf 9999999999690206-------9-----0988853999999999999999974999867889964999850589873--
Q ss_pred EEECCCCCCCHHHHHH----HHHHHCCHHHHHHHHHCCCC------EEEEEECCCCCCCCCCCCCCCCC--CCCEEHHHH
Q ss_conf 6412765442256666----66530440225887625972------35211013556555676656344--510000377
Q gi|254780752|r 516 PENYSKNFSGASTLRF----GLEKSRNLMTVRLAHNMGMT------VVADYAENFGIYDKMLPVLPMSL--GAGETTVLR 583 (817)
Q Consensus 516 p~N~~~~~~G~itl~~----Al~~S~N~~~v~l~~~~G~~------~~~~~~~~~Gi~~~~~~~~s~al--G~~~vtpl~ 583 (817)
+..-+-...+|+++ .|..|-|-.++-|++.+|-. .+-+.|+++|+.+-...+++ +| ...-.|.-+
T Consensus 77 --~~~l~~ge~~tv~dLL~~lll~S~NdAA~alAe~i~Gs~~~Fv~~MN~~A~~lG~~~T~f~np~-Gl~~~~~~ttA~D 153 (344)
T 3a3j_A 77 --KMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPH-GLDDPNQYSSARD 153 (344)
T ss_dssp --CCCCCTTCEEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCSSCBCSSSS-CCCCTTCBBCHHH
T ss_pred --EEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCC-EECCCCCCCCHHH
T ss_conf --2533489768899998777651388099999988089899999999999998388535887453-2358887665999
Q ss_pred HHHHHH
Q ss_conf 674322
Q gi|254780752|r 584 MVSAYA 589 (817)
Q Consensus 584 la~aya 589 (817)
||..-.
T Consensus 154 la~l~~ 159 (344)
T 3a3j_A 154 MAIIGA 159 (344)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999