HHsearch results for GI: 254780752 and protein with PDBid: 3fwm_A
>3fwm_A Penicillin-binding protein 1B; bacterial cell WALL synthesis, antibiotics design, transferase, hydrolase; HET: M0E; 2.16A {Escherichia coli} PDB: 3fwl_A*
Probab=100.00 E-value=0 Score=1262.40 Aligned_cols=586 Identities=29% Similarity=0.457 Sum_probs=536.6
Q ss_pred CCEEEEEE---CCCEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 94966661---256046417996978885454332146113387379999999999863204788677611479998888
Q gi|254780752|r 60 GALMAEYA---RENRLFLPIQIIPSHVKYAFVSAEDKNFYYHSGVDIFGIMRAVLHNIRNISHGRRPEGASTITQQVAKN 136 (817)
Q Consensus 60 G~~i~~~~---~~~R~~v~~~~ip~~l~~A~iA~ED~rFy~H~GvD~~gi~RA~~~ni~~~~~g~~~qGgSTITQQlaKn 136 (817)
..+|+.++ .|+|++|++++||++|++||||+||+|||+|+|||++||+||++.||+ +|+.+|||||||||||||
T Consensus 146 p~~i~~~~~~~~e~R~~v~~~~iP~~l~~A~la~ED~~Fy~H~Gvd~~~i~RA~~~nl~---~g~~~qGgSTiTQQl~Kn 222 (751)
T 3fwm_A 146 PRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLT---AGRTVQGASTLTQQLVKN 222 (751)
T ss_dssp CCEEEEECCTTSEECCCCCSTTSCHHHHHHHTTTC------------------------------------CHHHHHHHH
T ss_pred CHHEEEECCCCCCCEEECCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCCCCHHHHHHHH
T ss_conf 23505642688873567176996999985502052574135798099999999999711---788477714099999876
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC----CCCHHHHHHHHHCCCHHHCCCCCEEEEEEECC
Q ss_conf 77088832999999999999998660799999997201426743----31099999987354234403027125444015
Q gi|254780752|r 137 FLLTSNQTMDRKIKEILLSFRLEKAYDKEKILEFYLNEIFFGFN----SYGIASAALTYFNKSVSELTIEEAAYLAALPK 212 (817)
Q Consensus 137 ~~l~~e~t~~RK~~E~~lA~~lE~~~sK~eILe~YLN~v~~G~~----~yGv~aAA~~YF~K~~~dLtl~EaA~LAgi~~ 212 (817)
+|+++|||+.||++|+++|++||++||||||||+|||.||||++ +|||++||++||||+++|||++|||+||||+|
T Consensus 223 ~~l~~ert~~RK~~E~~~A~~lE~~ysK~eILe~YLN~vy~G~~~~~~i~Gi~~Aa~~YFgk~~~~L~l~e~A~Lagl~k 302 (751)
T 3fwm_A 223 LFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVK 302 (751)
T ss_dssp HHCCSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCEEEEETTEEEESHHHHHHHHTSSCGGGCCHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHEEECC
T ss_conf 11689888899999999999999986999999997632636789767404299999988299978948315377653267
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCC
Q ss_conf 76433211111466789988876665420111256888753011124454322234571567998853110012433125
Q gi|254780752|r 213 GPSNYDPFRKNKAAIARRNWVIDRMEENGYISQEQALVAKQKPLKITIKQRRSHLFGSEYFAEEVRRQLIDRYGEKALYE 292 (817)
Q Consensus 213 ~Ps~y~P~~np~~a~~Rr~~VL~~M~~~g~It~~e~~~a~~~~i~~~~~~~~~~~~~a~yf~e~V~~~l~~~~ge~~l~~ 292 (817)
+||.|||++||+++++|||+||++|+++|+||++||++|+++|+.+... ......+|||+++|++||.+.++++.++.
T Consensus 303 ~Ps~y~P~~~p~~a~~Rr~~VL~~m~~~g~It~~~~~~a~~~pl~~~~~--~~~~~~~p~f~~~v~~el~~~~~~~~~~~ 380 (751)
T 3fwm_A 303 GASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPR--GGVISPQPAFMQLVRQELQAKLGDKVKDL 380 (751)
T ss_dssp CTTTSCTTTCSHHHHHHHHHHHTC-----------------------------CCSSSHHHHHHHHHHHHHHHTTSSTTS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8876786547899999889999888861556699999997373324555--55566566899999999987515531246
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
Q ss_conf 73289852488898999999998767654443210000001211248877863332013355541047652144026765
Q gi|254780752|r 293 DGLSIRTSLDPQLQLYARKALQNGLINYDQNDGFRGPIKRIDLKKDWGNTLASIPTLYDVPEWDIAVVLEVSNSHITIGI 372 (817)
Q Consensus 293 ~Gl~I~TTiD~~lQ~~Ae~ai~~~l~~~d~~~g~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 372 (817)
+|++||||||+++|++||+++.+.+..++.+..
T Consensus 381 ~Gl~I~TTLD~~lQ~~ae~al~~~l~~~~~~~~----------------------------------------------- 413 (751)
T 3fwm_A 381 SGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRK----------------------------------------------- 413 (751)
T ss_dssp SSCEEEECCCHHHHHHHHHHHHHHHHHHHHHHT-----------------------------------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------
T ss_conf 882798216889999999988740432122345-----------------------------------------------
Q ss_pred ECCCCCCCCEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCC
Q ss_conf 20334431000024442348889665200112233321000013646310123566515775225553116640656666
Q gi|254780752|r 373 RPTIDSNGKVTTERKKGIIEADSMRWVYNKEQTTEETSENRNVLSLGDVIYVEHINEGWRLRQIPKVQGGLIAMDPRTGR 452 (817)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gd~i~i~~~~~~~~l~~~p~~q~a~V~id~~TG~ 452 (817)
.+..|+|+|+|||+||+
T Consensus 414 ---------------------------------------------------------------~~~~~gA~Vv~Dp~TGe 430 (751)
T 3fwm_A 414 ---------------------------------------------------------------LSDLETAIVVVDRFSGE 430 (751)
T ss_dssp ---------------------------------------------------------------CSCCEEEEEEEETTTCB
T ss_pred ---------------------------------------------------------------CCCCCEEEEEEECCCCC
T ss_conf ---------------------------------------------------------------66663589998689997
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC--CCCCCCCCCCEEEEECC-CCEEEEEECCCC--CCCHH
Q ss_conf 11787213234443320012335665310000127887402--46654456523788037-852666412765--44225
Q gi|254780752|r 453 ILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALDSG--YTPASVIMDAPIEVVSR-GKIWKPENYSKN--FSGAS 527 (817)
Q Consensus 453 IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale~G--~tp~t~~~D~p~~~~~~-~~~~~p~N~~~~--~~G~i 527 (817)
|+|||||++|+.+.||||+++.|||||+||||+|++||++| +++++.+.|.|+.+..+ +..|+|+|+++. ++|.|
T Consensus 431 IlAmvGg~~~~~~~fNra~~a~r~pGSt~KP~~y~aAL~~g~~~~~~t~~~D~p~~~~~~~g~~~~p~n~d~~~~~~G~v 510 (751)
T 3fwm_A 431 VRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRV 510 (751)
T ss_dssp EEEEECSSSCSSCSSCHHHHCCEECGGGGHHHHHHHHHTCTTTCCTTCEEECSCCCEECSSSCEECCCCTTSCCCTTSEE
T ss_pred EEEEECCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCE
T ss_conf 89996444234455550001344555545417899999738874453374267637757998531786677665787623
Q ss_pred HHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCC-CCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEEEE
Q ss_conf 666666530440225887625972352110135565-5567665634451000037767432201574403544666764
Q gi|254780752|r 528 TLRFGLEKSRNLMTVRLAHNMGMTVVADYAENFGIY-DKMLPVLPMSLGAGETTVLRMVSAYAVFANGGKQIRPSFIDRI 606 (817)
Q Consensus 528 tl~~Al~~S~N~~~v~l~~~~G~~~~~~~~~~~Gi~-~~~~~~~s~alG~~~vtpl~la~aya~~AN~G~~~~P~~i~kI 606 (817)
++++||++|+|++++++++++|++++.+++++|||. ....+.++++||+.++||+|||+||++|||+|++++||+|++|
T Consensus 511 ~l~~AL~~S~N~~~v~l~~~lG~~~~~~~~~k~Gi~~~~~~~~ps~~lG~~~vTPlqmA~aYatiANgG~~~~P~~I~~I 590 (751)
T 3fwm_A 511 MLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSV 590 (751)
T ss_dssp EHHHHHHTTCHHHHHHHHHHHCHHHHHHHHHHHTCCGGGCCCSGGGGGTCCEECHHHHHHHHHHHHTTSEECCCBSEEEE
T ss_pred EHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEECCEEEEEE
T ss_conf 14334340235999999886280899999998499855678980665388625788988899999749858356899999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEH--HCCCCCCEEEEECCC
Q ss_conf 102443013358532355666666655455467554353589999999999999873480432--105996046760467
Q gi|254780752|r 607 QNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTATG--KVRLNRPVAGKTGTT 684 (817)
Q Consensus 607 ~d~~G~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~~a~~~~~~L~~vv~~GTg~~--a~~~~~~iaGKTGTt 684 (817)
+|++|++|+++.+ ..++|+|+++|++|++||+.||++|||++ +...++++|||||||
T Consensus 591 ~d~dG~vi~~~~~---------------------~~~~vis~~tA~~v~~~M~~VV~~GTg~~~~~~~~~~~vAGKTGTT 649 (751)
T 3fwm_A 591 IAEDGKVLYQSFP---------------------QAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTT 649 (751)
T ss_dssp ECTTSCEEEECCC---------------------CCEECSCHHHHHHHHHHHHHHHHTSTTHHHHHHSGGGCCEEEEEEC
T ss_pred ECCCCCEEECCCC---------------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCC
T ss_conf 9899988703689---------------------7763689999999999999875556730011238997599988637
Q ss_pred CCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHCCCCCC
Q ss_conf 89702279845698799999826689827898644212179999999999748983006797771699840322775889
Q gi|254780752|r 685 SSYRDTWFIGYTPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIPSSRFVAPPGMSLIPINKWTGMLSKK 764 (817)
Q Consensus 685 ~~~~D~WfvG~tp~~~~~vWvG~D~~~~~~~~~~G~~~a~piw~~~m~~~~~~~p~~~f~~P~~iv~~~i~~~sG~la~~ 764 (817)
|+++|+||+||+|+|+++||||+|+++++ +.+|++.|+|||++||+.+ ...+.+|++|+||+.+.||..+|.+
T Consensus 650 ~~~rDaWFvG~tp~~~~~VWvG~Ddn~~~--~~tG~~~Aapiw~~~m~~~--~~~~~~~~~P~~i~~~~i~~~~g~~--- 722 (751)
T 3fwm_A 650 NNNVDTWFAGIDGSTVTITWVGRDNNQPT--KLYGASGAMSIYQRYLANQ--TPTPLNLVPPEDIADMGVDYDGNFV--- 722 (751)
T ss_dssp GGGSEEEEEEECSSEEEEEEEECTTCCCC--CCCTTHHHHHHHHHHHHSS--CCCCCCCCCCTTEEEEEECTTSCEE---
T ss_pred CCCCEEEEEECCCCEEEEEEEECCCCCCC--CCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCEEEEEECCCCCCC---
T ss_conf 99705999985899699999977899978--7844599999999999607--7888788998980588875887867---
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 9976089953178999865677776
Q gi|254780752|r 765 GDPDTIIEAFKPGTGPAETYTVIDE 789 (817)
Q Consensus 765 ~~~~~~~e~f~~gt~P~~~~~~~~~ 789 (817)
|+.+..++|+.|++|++.|..++.
T Consensus 723 -~~~~~~~~~~~~~~p~~~c~~~~~ 746 (751)
T 3fwm_A 723 -CSGGMRILPVWTSDPQSLCQQSEM 746 (751)
T ss_dssp -SSCCSEEEEEECSCTTHHHHHHTT
T ss_pred -CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -999844387579998654567888