HHsearch results for GI: 254780752 and protein with PDBid: 3mfd_A

>3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis}
Probab=97.26  E-value=0.00012  Score=48.21  Aligned_cols=129  Identities=21%  Similarity=0.224  Sum_probs=76.2

Q ss_pred             EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEE--EC
Q ss_conf             1664065666611787213234443320012335665310000127887402466544565237880378526664--12
Q gi|254780752|r  442 GLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYAAALDSGYTPASVIMDAPIEVVSRGKIWKPE--NY  519 (817)
Q Consensus       442 a~V~id~~TG~IlA~vGg~d~~~~~~NrA~~~~rqpGSt~KP~vy~~Ale~G~tp~t~~~D~p~~~~~~~~~~~p~--N~  519 (817)
                      +.|+||..||+||.--.            .+.+++|.|+-|.++...|||++- +++     .+.+..  ..|...  +.
T Consensus        11 saiv~D~~tG~iL~~kn------------~~~~~~pASlTKlmT~~v~le~~~-l~~-----~v~vs~--~a~~~~~s~~   70 (334)
T 3mfd_A           11 SAIIIDGASGRVLYAKD------------EHQKRRIASITKIMTAVLAIESGK-MDQ-----TVTVSA--NAVRTEGSAI   70 (334)
T ss_dssp             EEEEEETTTCCEEEEES------------TTCCBCCGGGGHHHHHHHHHHTTC-TTS-----EEECCH--HHHHCCSSCC
T ss_pred             EEEEEECCCCCCHHHCC------------CCCCCCCHHHHHHHHHHHHHHCCC-CCC-----EEEECH--HHHCCCCCEE
T ss_conf             99999999998902069------------099895688999999999995889-998-----699889--9943799535


Q ss_pred             CCCCCC-HHHHHH----HHHHHCCHHHHHHHHHCCCC------EEEEEECCCCCCCCCCCCCCCCCC---CCEEHHHHHH
Q ss_conf             765442-256666----66530440225887625972------352110135565556766563445---1000037767
Q gi|254780752|r  520 SKNFSG-ASTLRF----GLEKSRNLMTVRLAHNMGMT------VVADYAENFGIYDKMLPVLPMSLG---AGETTVLRMV  585 (817)
Q Consensus       520 ~~~~~G-~itl~~----Al~~S~N~~~v~l~~~~G~~------~~~~~~~~~Gi~~~~~~~~s~alG---~~~vtpl~la  585 (817)
                      . -..| .+++++    .|..|-|-.++-|++.++-.      .+-+.|+++|+.+-...+ +.+|-   ..-.|+-+||
T Consensus        71 ~-l~~g~~~tv~dLl~~~li~SaNdAA~aLAe~i~Gs~~~Fv~~MN~~A~~lG~~~T~f~n-~~GL~~~~~~~sTa~Dla  148 (334)
T 3mfd_A           71 Y-LTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQN-PHGLDDHENHYSTAYDMA  148 (334)
T ss_dssp             C-CCTTCEEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHTCTTCBCSS-SSCCSCSSSCBBCHHHHH
T ss_pred             E-ECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEC-CCCCCCCCCCCCCHHHHH
T ss_conf             3-54898760999999998763577999999872697899999999999995885760146-756758667775699999


Q ss_pred             HHHHHCC
Q ss_conf             4322015
Q gi|254780752|r  586 SAYAVFA  592 (817)
Q Consensus       586 ~aya~~A  592 (817)
                      .....+.
T Consensus       149 ~l~~~~~  155 (334)
T 3mfd_A          149 ILTKYAM  155 (334)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHC
T ss_conf             9998640