PSIBLAST alignment of GI: 254780752 and protein with PDB id: 2fff

>gi|110591396|pdb|2FFF|B Chain B, Open Form Of A Class A Transpeptidase Domain Length = 453
 Score =  119 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 83/349 (23%), Positives = 135/349 (38%), Gaps = 51/349 (14%)

Query: 438 KVQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMRQPGSCFKPIVYA-AALDSGYTP 496
           +V+ G + MD +TG IL  +GG +Y +++ N +    R P S  KP++    A+D G   
Sbjct: 83  RVEVGNVLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMG 142

Query: 497 ASVIMDAPIEVVSRGKIWKPENYSKNFSGASTLRFGLEKSRNL---MTVRLAHNMGMTVV 553
           +  I+       + G        +   +G  TL   L  S N+    T R+    G+  V
Sbjct: 143 SETILSNYPTNFANGNP--IMYANSKGTGMMTLGEALNYSWNIPAYWTYRMLRENGVD-V 199

Query: 554 ADYAENFGIYDKMLPVLPMSLGAG-ETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGK 612
             Y E  G       +  + +G G E TV +  + Y   AN G   +   I +I+   G+
Sbjct: 200 KGYMEKMGYEIPEYGIESLPMGGGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGR 259

Query: 613 TIFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGV----IKHGTAT 668
            ++  +                     DK  QV    TA  +  +L  V    +     +
Sbjct: 260 VVYEYQ---------------------DKPVQVYSKATATIMQGLLREVLSSRVTTTFKS 298

Query: 669 GKVRLNRPVA-----GKTGTTSSYRDTWFIGYTPTLVVGVYVGYDIPAPLNNHATGSTLT 723
               LN  +A     GKTGTT+   + W +  TP L +G ++G+D    L+  A  S   
Sbjct: 299 NLTSLNPTLANADWIGKTGTTNQDENMWLMLSTPRLTLGGWIGHDDNHSLSRRAGYSNN- 357

Query: 724 APIFNAFM----KEALKNIP----SSRFVAPPGMSLIPINKWTGMLSKK 764
               + +M        +  P    + RF   P +    + K TG    K
Sbjct: 358 ----SNYMAHLVNAIQQASPSIWGNERFALDPSVVKSEVLKSTGQKPGK 402