RPSBLAST alignment of GI: 254780752 and protein with PDBid: 1k38
>1k38_A Penicillinase, beta-lactamase OXA-2; serine beta-lactamase, hydrolase, antibiotic resistance, carbamylated lysine; HET: KCX; 1.50A {Salmonella typhimurium} SCOP: e.3.1.1 Length = 254
Score = 123 bits (310), Expect = 1e-28
Identities = 35/319 (10%), Positives = 71/319 (22%), Gaps = 92/319 (28%)
Query: 438 KVQGGLIAMDPRTGRILATIGGFSYSQSEFNRSTQAMR-QPGSCFKPIVYAAALDSGYTP 496
+ +G ++ D R + F+ R P S FK ALD+G
Sbjct: 18 QAKGTIVVADERQADRAMLV---------FDPVRSKKRYSPASTFKIPHTLFALDAGAVR 68
Query: 497 ASVIMDAPIEVVSRGKIWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNMGMTVVADY 556
+ + LR + S + A +G Y
Sbjct: 69 DEFQIFRW---------DGVNRGFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRY 119
Query: 557 AENFGIYDKMLPVLP---MSLGAGETTVLRMVSAYAVFANGGKQIRPSFIDRIQNRYGKT 613
+ + G+ + ++ R
Sbjct: 120 LKKIDYGNADPSTSNGDYWIEGSLAISAQEQIAFLRKLYRNELPFRVEHQR--------- 170
Query: 614 IFNQEQRICDDCNYDTWNGQDEPEIIDKREQVLDPMTAYQITSMLEGVIKHGTATGKVRL 673
+ ++
Sbjct: 171 ---------------------------------------LVKDLMIVEAGRN-------- 183
Query: 674 NRPVAGKTGTTSSYRDTWFIGY----TPTLVVGVYVGYDIPAPLNNHATGSTLTAPIFNA 729
+ KTG R W++G+ T ++ + + D P N I A
Sbjct: 184 -WILRAKTGWE--GRMGWWVGWVEWPTGSVFFALNI--DTP----NRMDDLFKREAIVRA 234
Query: 730 FMKEALKNIPSSRFVAPPG 748
++ +++ +P + V
Sbjct: 235 ILR-SIEALPPNPAVNSDA 252