RPSBLAST alignment of GI: 254780752 and protein with PDBid: 2wad
>2wad_A Penicillin-binding protein 2B; peptidoglycan synthesis, transmembrane, antibiotic resistance, cell shape, peptidoglycan, cell membrane; 2.18A {Streptococcus pneumoniae} PDB: 2wae_A 2waf_A Length = 680
Score = 91.8 bits (226), Expect = 5e-19
Identities = 50/353 (14%), Positives = 95/353 (26%), Gaps = 79/353 (22%)
Query: 445 AMDPRTGRILATIGGFSY-----SQSEFNRSTQAMRQPGSCFKPIVYAAALDSGYTPASV 499
A++P+TG +L+ G + + + PGS K ++ ++G +
Sbjct: 347 ALNPQTGAVLSMSGLKHDLKTGELTPDSLGTVTNVFVPGSVVKAATISSGWENGVLSGNQ 406
Query: 500 IMDAPIEVVSRGKIWKPENYSKNFSGASTLRFGLEKSRNLMTVRLAHNM----------- 548
+ V S T LE S N V+ A +
Sbjct: 407 TLTDQPIVFQGSAPIYSWYKLAYGSFPITAVEALEYSSNAYVVQTALGIMGQTYQPNMFV 466
Query: 549 -------GMTVVADYAENFGIYDKMLPVLPMS-------------------LGAGETTVL 582
M + +G+ LP T +
Sbjct: 467 GTSNLESAMGKLRSTFGEYGLGSATGIDLPDESTGLVPKEYNFANFITNAFGQFDNYTPM 526
Query: 583 RMVSAYAVFANGGKQIRPSFIDRIQNRYGKTIFNQEQRICDDCNYDTWNGQDEPEIIDKR 642
++ A AN G ++ P ++ I + K + + + +
Sbjct: 527 QLAQYVATIANNGVRLAPHIVEGIYDNNDKGGLGELIQ--------------AIDTKEIN 572
Query: 643 EQVLDPMTAYQITSMLEGVIKHGTATGKVR-----LNRPVAGKTGTTSSYR-------DT 690
+ + + V + R ++GKTGT SY +T
Sbjct: 573 KVNISESDMAILHQGFYQVSHGTSPLTTGRAFSDGATVSISGKTGTGESYVAGGQEATNT 632
Query: 691 WFIGYTPT----LVVGVYVGYDIPAPLNNHATGSTLTAPIFNAFMKEALKNIP 739
+ Y PT + V V +N + I + ++ P
Sbjct: 633 NAVAYAPTENPQIAVAVVFP-------HNTNLTKNVGPAIARDIINLYNQHHP 678