HHsearch alignment for GI: 254780753 and conserved domain: COG1186
>COG1186 PrfB Protein chain release factor B [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=636.24 Aligned_cols=238 Identities=68% Similarity=1.044 Sum_probs=235.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHEEECCEEEEEEECCC
Q ss_conf 48998217787027789999999899998775311344420545458501346885055610000010120689873046
Q gi|254780753|r 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 (355)
Q Consensus 117 ailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gwk~evi~~~~~e~~GiK~~~~~I~G~~ayg~Lk~E~GvHRv~Ri~~~ 196 (355)
T Consensus 1 ~~l~i~~g~gg~e~~dw~~~l~rmy~r~a~~~g~~~e~l~~~~g~~~g~ks~~~~~~g~~a~g~~~~e~g~hrlvr~Spf 80 (239)
T COG1186 1 AYLTIHAGAGGTEAQDWASMLLRMYTRWAERKGFKVEVLDTSDGEEAGIKSATLKIKGENAYGYLKTETGVHRLVRISPF 80 (239)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECHHHHHHHHHHCCEEEEEEECCC
T ss_conf 97997279885588999999999999999875985899860477304510379999646888888763254677850687
Q ss_pred CCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 66650356688788503442221112345503699853888655442731003588746974776655555224679999
Q gi|254780753|r 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 (355)
Q Consensus 197 ~s~gR~hTS~a~V~V~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a 276 (355)
T Consensus 81 ~~~~~R~tsf~~v~v~p~~~~~i~i~I~~~dl~idt~RASGaGGQhVNKt~SAVrlth~ptgivv~cq~eRSq~~n~~~a 160 (239)
T COG1186 81 DSNGRRHTSFASVEVFPELDISIEIEIPDDDLRIDTYRASGAGGQHVNKTDSAVRLTHLPTGIVVLCQNERSQHLNKALA 160 (239)
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEECCHHHHHHHHHHHHH
T ss_conf 75664155333310047777653100485216999887579998865552442899986777775188899999879999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEECCHHHHHCCCHHHHHHHHHHCC
Q ss_conf 999999999999999999999987413323322210130158568331111472507977871897799999997225
Q gi|254780753|r 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 (355)
Q Consensus 277 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~iRtY~~~p~~~v~DhR~~~~~~~~~~vl~G~ld~~i~a~l~~~ 354 (355)
T Consensus 161 ~~~l~~kL~~~~~~~Rsqe~n~~~a~~k~i~wg~qirsyv~~p~~~vKd~Rt~~E~~~~~~v~dg~~~~~~~~~l~~~ 238 (239)
T COG1186 161 RKMLKGKLYILAQEKRSQEKNRERALKKLIGWGNQIRSYVLDPYQPTKDLRTGVERRNKSKVLDGDKDGFIKAYLKWD 238 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHCC
T ss_conf 998777999998898999998999876677887732126788643466532100123578764324778877554035