HHsearch alignment for GI: 254780753 and conserved domain: pfam03462
>pfam03462 PCRF PCRF domain. This domain is found in peptide chain release factors.
Probab=100.00 E-value=4.2e-34 Score=264.46 Aligned_cols=110 Identities=46% Similarity=0.660 Sum_probs=104.1
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6310000002345667655577401589988----763034576624899821778702778999999989999877531
Q gi|254780753|r 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 (355)
Q Consensus 75 La~ee~D~el~eE~~~el~~l~~~le~LE~~----~Lls~e~D~~nailEI~AGaGG~EA~dwA~~L~rMY~r~ae~~gw 150 (355)
T Consensus 2 l~~~e~D~e~~~~a~~e~~~l~~~l~~le~~l~~~llp~~~~D~~~~ilEI~aGaGG~EA~~fa~~L~rMY~r~ae~~gw 81 (115)
T pfam03462 2 LLEEEDDPELRELAEEELEELEKELEELEKELLNLLLPLDPYDDKNAILEIRAGAGGTEAQLFAEDLLRMYQRYAERKGW 81 (115)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 02107998999999999999999999999999997079997766786899936889689999999999999999997799
Q ss_pred HHHHHHCCCCCCCCEEEEEEEEECCCCCHHHEEE
Q ss_conf 1344420545458501346885055610000010
Q gi|254780753|r 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 (355)
Q Consensus 151 k~evi~~~~~e~~GiK~~~~~I~G~~ayg~Lk~E 184 (355)
T Consensus 82 ~~evl~~~~~e~gG~k~a~~~I~G~~aYg~Lk~E 115 (115)
T pfam03462 82 KVEVLDYSEGEEGGIKEATLEIEGEGAYGYLKFE 115 (115)
T ss_pred EEEEEECCCCCCCCEEEEEEEEECCCHHHHCCCC
T ss_conf 8899755887777547999999863858753388