HHsearch alignment of GI: 254780753 and MMDB domain: 2jy9_A_

>2jy9_A (A:) Putative tRNA hydrolase domain; GFT protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=99.94  E-value=7.6e-29  Score=226.46  Aligned_cols=116  Identities=28%  Similarity=0.369  Sum_probs=94.6

Q ss_pred             CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE------------------------ECCCHHHHHHHHHH
Q ss_conf             034422211123455036998538886554427310035887------------------------46974776655555
Q gi|254780753|r  212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------------------------HIPTGVVVQCQQER  267 (355)
Q Consensus       212 ~P~~~~~~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~------------------------H~ptgi~v~~q~~r  267 (355)
                      +|++++  ++.|+++||++.|+|||||||||||||+|+|+|+                        |+||||+|.||++|
T Consensus         1 ~~~~~~--~i~I~~~~l~~~f~RSsGpGGQ~VNKt~skV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~s~~~R   78 (148)
T 2jy9_A            1 MIAISR--TVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDDGVIIIKAQEFR   78 (148)
T ss_dssp             CBCCSS--SCCBCSTTCEEEEECCSCCCSSCSCSCSCEEEEEECSTTSCCCHHHHHHHHHSCCTTBCSSSCEEEEECSSS
T ss_pred             CCCCCC--CCCCCHHHEEEEEEECCCCCCCCCCHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf             943478--782576990789887679987640122201478973144679979999999974545458971899976758


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf             224679999999999999999999999999987--------41332332221013015856833111147
Q gi|254780753|r  268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGE--------SSKTEIGWGRQIRSYVLQPYQMVKDLRTN  329 (355)
Q Consensus       268 sq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~g~~iRtY~~~p~~~v~DhR~~  329 (355)
                      ||++|++.|+.+|+++|.+...+..........        ..+..-++..++|+|||+|+++|+||||+
T Consensus        79 sQ~~N~~~al~kL~~~l~~~~~~~k~~~~~~~~~~~~r~rl~~Kk~rs~~K~~R~~~~~~~~~~~d~~~~  148 (148)
T 2jy9_A           79 SQELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSKAQKSSVKALRGKVRRPLDLEHHHHHH  148 (148)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
T ss_conf             9999999999999999998650777622467467899999999999899986248988975410101469