HHsearch alignment of GI: 254780753 and MMDB domain: 3d5a_X_211-296

>3d5a_X (X:211-296) RF1, peptide chain release factor 1; ribosome, coiled coil, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding; 3.21A {Thermus thermophilus HB27} PDB: 2b64_Y 3d5c_X
Probab=99.91  E-value=5.5e-25  Score=198.83  Aligned_cols=86  Identities=47%  Similarity=0.713  Sum_probs=77.0

Q ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             23455036998538886554427310035887469747766555552246799999999999999999999999999874
Q gi|254780753|r  222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES  301 (355)
Q Consensus       222 ~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~  301 (355)
                      .|+++||+|+|+|||||||||||||+|||||+|+||||+|.||++|||++||+.||.+|+++|++...+++.......  
T Consensus         1 sI~~~dl~~~~~rssGpGGQ~VNk~~t~V~i~h~ptgi~v~~~~~RSq~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~--   78 (86)
T 3d5a_X            1 ALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKT--   78 (86)
T ss_dssp             CCCGGGEEEEEECCCSCCHHHHHHCCCEEEEEETTTTEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCCCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf             555421003320367521001566740335797588769981332144899999999999999999998899999998--


Q ss_pred             HHHHCCCC
Q ss_conf             13323322
Q gi|254780753|r  302 SKTEIGWG  309 (355)
Q Consensus       302 ~~~~~~~g  309 (355)
                      ++..+.||
T Consensus        79 ~k~~~~rG   86 (86)
T 3d5a_X           79 RLAQIGTG   86 (86)
T ss_dssp             HHHHSCGG
T ss_pred             HHHCCCCC
T ss_conf             87137434