HHsearch alignment of GI: 254780753 and MMDB domain: 3d5a_X_211-296
>3d5a_X (X:211-296) RF1, peptide chain release factor 1; ribosome, coiled coil, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding; 3.21A {Thermus thermophilus HB27} PDB: 2b64_Y 3d5c_X
Probab=99.91 E-value=5.5e-25 Score=198.83 Aligned_cols=86 Identities=47% Similarity=0.713 Sum_probs=77.0
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23455036998538886554427310035887469747766555552246799999999999999999999999999874
Q gi|254780753|r 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 (355)
Q Consensus 222 ~i~~~dl~i~~~rssg~ggq~vn~t~savri~H~ptgi~v~~q~~rsq~~Nk~~a~~~l~~~l~~~~~~~~~~~~~~~~~ 301 (355)
.|+++||+|+|+|||||||||||||+|||||+|+||||+|.||++|||++||+.||.+|+++|++...+++.......
T Consensus 1 sI~~~dl~~~~~rssGpGGQ~VNk~~t~V~i~h~ptgi~v~~~~~RSq~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~-- 78 (86)
T 3d5a_X 1 ALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKT-- 78 (86)
T ss_dssp CCCGGGEEEEEECCCSCCHHHHHHCCCEEEEEETTTTEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_conf 555421003320367521001566740335797588769981332144899999999999999999998899999998--
Q ss_pred HHHHCCCC
Q ss_conf 13323322
Q gi|254780753|r 302 SKTEIGWG 309 (355)
Q Consensus 302 ~~~~~~~g 309 (355)
++..+.||
T Consensus 79 ~k~~~~rG 86 (86)
T 3d5a_X 79 RLAQIGTG 86 (86)
T ss_dssp HHHHSCGG
T ss_pred HHHCCCCC
T ss_conf 87137434