HHsearch results for GI: 254780753 and protein with PDBid: 2jy9_A
>2jy9_A Putative tRNA hydrolase domain; GFT protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=99.67 E-value=3e-17 Score=142.51 Aligned_cols=69 Identities=38% Similarity=0.556 Sum_probs=61.4
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEE------ECCCH------------------HHHHHHHHHHHHHHHH
Q ss_conf 11123455036998538886554427310035887------46974------------------7766555552246799
Q gi|254780753|r 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT------HIPTG------------------VVVQCQQERSQHKNKA 274 (355)
Q Consensus 219 ~~i~i~~~dl~i~~~rssg~ggq~vn~t~savri~------H~ptg------------------i~v~~q~~rsq~~Nk~ 274 (355)
-.|.|+++||.+.+.|||||||||||||+|+|.|. ++|.+ |+|.||+.|||++|++
T Consensus 6 ~~i~Ip~~ei~~~f~RSsGPGGQnVNK~~TkV~Lr~~l~~~~l~~~~~~rl~~~~~~ri~~~g~lvI~sq~~RSQ~~Nr~ 85 (148)
T 2jy9_A 6 RTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDDGVIIIKAQEFRSQELNRE 85 (148)
T ss_dssp SSCCBCSTTCEEEEECCSCCCSSCSCSCSCEEEEEECSTTSCCCHHHHHHHHHSCCTTBCSSSCEEEEECSSSCHHHHHH
T ss_pred CCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH
T ss_conf 87717879907888876899876311553331247314556799899999999736665689508999778589999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780753|r 275 QAWNMLRAKLYEL 287 (355)
Q Consensus 275 ~a~~~l~~~l~~~ 287 (355)
.|+..|.+.|.+.
T Consensus 86 ~Al~kL~~~I~~a 98 (148)
T 2jy9_A 86 AAIARLVAVIKEL 98 (148)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999986