gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. Length = 354
>gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. Length = 354

Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 8/329 (2%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQETS 89 DP + ++ + L R + I I+E + L D L + + + E Sbjct: 20 SDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAERE 79 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L R + + + L D DA +E+ AG GG E+ +A L MY R+AE+ Sbjct: 80 ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ H + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + ++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLP-KAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G + IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R VL G L ++A + Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEALKRADQ 344

PSIBLAST alignment of GI: 254780753 and protein with PDB id: 2b64