PSIBLAST alignment of GI: 254780753 and protein with PDB id: 2b9m
>gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400 Length = 365
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 153/353 (43%), Positives = 209/353 (59%), Gaps = 5/353 (1%)
Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
+L+++L L G D RL L + EDP LW + A+ + +E L + +
Sbjct: 5 RLAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64
Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
++ L L L+E E+ + L+ +++ ++LL+ +A L +
Sbjct: 65 LESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120
Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180
Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240
Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300
Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K
Sbjct: 301 EVRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352