RPSBLAST alignment for GI: 254780753 and conserved domain: COG0216
>gnl|CDD|30565 COG0216, PrfA, Protein chain release factor A [Translation, ribosomal structure and biogenesis]. Length = 363
Score = 260 bits (665), Expect = 5e-70
Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 11/344 (3%)
Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
++ ++R L DP + + E + L +E L+ + +E + D E+
Sbjct: 10 ESLLERYEELEALLSDPEVISDPDEYRKLSKEYAELEPIVEKYREYKKAQEDLEDAKEML 69
Query: 77 LEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
EE D + + + ++ ++ ++E ++ + LL D + LE+ AG GG E+
Sbjct: 70 AEEKDPEMREMAEEEIKELEAKIEELEEELKILLLPKDPNDDKNIILEIRAGTGGDEAAL 129
Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
+A L RMY+R+AE + +K E L + E G K I G Y LK E GVHR+ R
Sbjct: 130 FAGDLFRMYSRYAESKGWKVEILSASESELGGYKEIIASISGKGVYSRLKFESGVHRVQR 189
Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
+ +S R HTS +++ V P V++ EIEI+ D RIDT+R+SGAGGQHVNTTDSAVRI
Sbjct: 190 VPATESQGRIHTSAATVAVLPEVEEVEEIEINPKDLRIDTFRSSGAGGQHVNTTDSAVRI 249
Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
TH+PTG+VV+CQ ERSQHKNKA+A +LRA+LY+ E QK + K+++G G
Sbjct: 250 THLPTGIVVECQDERSQHKNKAKAMKVLRARLYDAERQKAQA--EEASERKSQVGSGDRS 307
Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
+IR+Y P V D R N+ +V++ G LD+ + A +A
Sbjct: 308 ERIRTYNF-PQNRVTDHRINLTLYKLDEVMEGGKLDEIIDALIA 350