RPSBLAST alignment for GI: 254780753 and conserved domain: COG0216

>gnl|CDD|30565 COG0216, PrfA, Protein chain release factor A [Translation, ribosomal structure and biogenesis]. Length = 363
 Score =  260 bits (665), Expect = 5e-70
 Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 11/344 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++ ++R   L     DP +  +  E + L +E   L+  +   +E +    D     E+ 
Sbjct: 10  ESLLERYEELEALLSDPEVISDPDEYRKLSKEYAELEPIVEKYREYKKAQEDLEDAKEML 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVE--YKQFESLL--SGEADSNDAYLEVHAGAGGTESQD 132
            EE D  + +   + ++ ++ ++E   ++ + LL      D  +  LE+ AG GG E+  
Sbjct: 70  AEEKDPEMREMAEEEIKELEAKIEELEEELKILLLPKDPNDDKNIILEIRAGTGGDEAAL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE + +K E L   + E  G K     I G   Y  LK E GVHR+ R
Sbjct: 130 FAGDLFRMYSRYAESKGWKVEILSASESELGGYKEIIASISGKGVYSRLKFESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P V++  EIEI+  D RIDT+R+SGAGGQHVNTTDSAVRI
Sbjct: 190 VPATESQGRIHTSAATVAVLPEVEEVEEIEINPKDLRIDTFRSSGAGGQHVNTTDSAVRI 249

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A  +LRA+LY+ E QK +         K+++G G   
Sbjct: 250 THLPTGIVVECQDERSQHKNKAKAMKVLRARLYDAERQKAQA--EEASERKSQVGSGDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V++ G LD+ + A +A
Sbjct: 308 ERIRTYNF-PQNRVTDHRINLTLYKLDEVMEGGKLDEIIDALIA 350