HHsearch alignment for GI: 254780754 and conserved domain: KOG2178

Probab=100.00  E-value=0  Score=369.79  Aligned_cols=220  Identities=25%  Similarity=0.417  Sum_probs=188.7

Q ss_pred             HHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC---EEEEEEEECCCCCCC
Q ss_conf             55779999879548999999974128729941534332010445878999866420124320---344345421244442
Q gi|254780754|r   35 EEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFH---PLKMTVFDYDNSICA  111 (264)
Q Consensus        35 ~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~  111 (264)
T Consensus       167 ~~~D~iItLGGDGTvL~aS~LFq~~VPPV~sFslGslGFLt-pf~f~~f~~~l~~v~~~~~~v~lR~RL~C~i~rk~~~~  245 (409)
T KOG2178         167 NRFDLIITLGGDGTVLYASSLFQRSVPPVLSFSLGSLGFLT-PFPFANFQEQLARVLNGRAAVNLRMRLRCSLKRKDLAE  245 (409)
T ss_pred             CCEEEEEEECCCCCEEEEHHHHCCCCCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCC
T ss_conf             12569999668864887546446789975886058732455-66478999999999637634766555799999703666


Q ss_pred             -----EEEEEEEEEEEEECCCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEEC
Q ss_conf             -----015775347997268764236788898766787653121035079822665044675229817740886058630
Q gi|254780754|r  112 -----ENILAINEVSIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTP  186 (264)
Q Consensus       112 -----~~~~AlNEi~i~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~~~~itp  186 (264)
T Consensus       246 ~~~~~~~~~vLNEvvIdRGpsP~----ls~l~ly~d~~~-iT~vq~DGliVaTPTGSTAYS~sAGGSlvhP~vpAIlvTP  320 (409)
T KOG2178         246 KTHAASSHYVLNEVVIDRGPSPF----LSNLDLYVDDKL-ITKVQGDGLIVATPTGSTAYSASAGGSLVHPSVPAILVTP  320 (409)
T ss_pred             CCCCCCEEEEEEEEEECCCCCCH----HCCEEEEECCCE-EEEEECCEEEEECCCCHHHHHHHCCCCEECCCCCEEEEEC
T ss_conf             66442137874357873689812----204157863707-9999616699966886156476449954469977489824


Q ss_pred             CCCCCHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCE---ECCCCCEEEEEECCCCCEEEEECCC--CCHHHHHHHHH
Q ss_conf             354330111100278841489997487887589998898---8148778999987995189996488--88999888875
Q gi|254780754|r  187 VSPFKPRRWHGAILPNDVMIEIQVLEHKQRPVIATADRL---AIEPVSRINVTQSSDITMRILSDSH--RSWSDRILTAQ  261 (264)
Q Consensus       187 I~p~~l~~~rplVl~~~~~I~i~i~~~~~~~~~~~~D~~---~~~~~~~i~I~~s~~~~~~li~~~~--~~f~~ril~~k  261 (264)
T Consensus       321 ICPhSL-SFRPIIlPds~~L~I~i~~dsR~~awvSfDG~~r~El~~GD~i~I~tS~-ypfPti~~s~~~~dWf~-sl~~~  397 (409)
T KOG2178         321 ICPHSL-SFRPIILPDSSELRVEVPLDSRSTAWVSFDGRPRQELSLGDYIDITTSR-YPFPTIISSDEESDWFE-SLARL  397 (409)
T ss_pred             CCCCCC-CCCCEECCCCCEEEEEECCCCCCCCEEEECCCCHHHCCCCCEEEEEECC-CCCCEEECCCCHHHHHH-HHHHH
T ss_conf             688765-6566672686679999576546560587658505443688559998646-77760424752436999-99987


Q ss_pred             CC
Q ss_conf             17
Q gi|254780754|r  262 FS  263 (264)
Q Consensus       262 F~  263 (264)
T Consensus       398 L~  399 (409)
T KOG2178         398 LN  399 (409)
T ss_pred             CC
T ss_conf             07