HHsearch results for GI: 254780754 and protein with PDBid: 1u0t_A
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=100.00 E-value=0 Score=418.15 Aligned_cols=250 Identities=25% Similarity=0.404 Sum_probs=208.9
Q ss_pred CCEEEEEEECCC-HHHHHHHHHHHHHCCCC---------------------------------------CHHHCCEEEEE
Q ss_conf 650599995599-89999999999870788---------------------------------------84557799998
Q gi|254780754|r 4 NIQKIHFKASNA-KKAQEAYDKFVKIYGNS---------------------------------------TSEEADVIVVL 43 (264)
Q Consensus 4 ~~~ki~i~~~~~-~~a~~~~~~l~~~~~~~---------------------------------------~~~~~Dlii~i 43 (264)
..+|+.++.+.. +++.+.++++.+++.+. ..+++|++|++
T Consensus 3 ~~r~v~lv~~~~k~~a~~~a~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvivl 82 (307)
T 1u0t_A 3 AHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVL 82 (307)
T ss_dssp --CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 88899999809998999999999999997899899984313314654467411220375321024653444564589997
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEE---CCCCCCCEEEEEEEEE
Q ss_conf 7954899999997412872994153433201044587899986642012432034434542---1244442015775347
Q gi|254780754|r 44 GGDGFMLQSFHQSKEYDKPIYGMNCGSVGFLMNEYCIENLVERLSVAVECTFHPLKMTVFD---YDNSICAENILAINEV 120 (264)
Q Consensus 44 GGDGT~L~a~~~~~~~~~PilGIn~G~lGFL~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~AlNEi 120 (264)
|||||||+|+|.+.+.++||||||+|++|||+ +++++++.+.+.++..+.+..+++..+. .+++......+||||+
T Consensus 83 GGDGT~L~aa~~~~~~~~PilGIN~G~lGFL~-~~~~~~~~~~l~~~~~g~~~~~~r~~l~~~~~~~~~~~~~~~alNdv 161 (307)
T 1u0t_A 83 GGDGTFLRAAELARNASIPVLGVNLGRIGFLA-EAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEV 161 (307)
T ss_dssp ECHHHHHHHHHHHHHHTCCEEEEECSSCCSSC-SEEGGGHHHHHHHHHHTCCEEEEECCEEEEEEETTEEEEEEEESSEE
T ss_pred CCCHHHHHHHHHHCCCCCEEEEECCCCCCEEE-CCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEECCCCCEE
T ss_conf 68778999999746469839997589721730-36505589999998717836987655789981698055301012236
Q ss_pred EEEECCCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHCCC
Q ss_conf 99726876423678889876678765312103507982266504467522981774088605863035433011110027
Q gi|254780754|r 121 SIIRKPGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESRHLLLTPVSPFKPRRWHGAIL 200 (264)
Q Consensus 121 ~i~r~~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~~~~itpI~p~~l~~~rplVl 200 (264)
+|.|+... +++.+++++||++ +++|+||||||||||||||||+||||||++|+++++++||||||++.. ||+|+
T Consensus 162 vi~r~~~~----~~~~~~v~i~g~~-~~~~~~DGlIvsTpTGSTAYslSaGGPIv~p~~~~i~vtpi~ph~l~~-rplVl 235 (307)
T 1u0t_A 162 SLEKGPRL----GVLGVVVEIDGRP-VSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFG-RPMVT 235 (307)
T ss_dssp EEECSSSS----SCEEEEEESSSSE-EEEEEESEEEEECTGGGGTHHHHTTCCEECTTCCCEEEEEESCSSSCC-CCEEE
T ss_pred EEEECCCC----CEEEEEEEECCEE-EEEEECCEEEECCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCC-CCEEE
T ss_conf 88615766----3579999989999-999960579982745443237767999668322304430046546789-98798
Q ss_pred CCCCEEEEEECCCCCCEEEEEECCE---ECCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHCC
Q ss_conf 8841489997487887589998898---81487789999879951899964888899988887517
Q gi|254780754|r 201 PNDVMIEIQVLEHKQRPVIATADRL---AIEPVSRINVTQSSDITMRILSDSHRSWSDRILTAQFS 263 (264)
Q Consensus 201 ~~~~~I~i~i~~~~~~~~~~~~D~~---~~~~~~~i~I~~s~~~~~~li~~~~~~f~~ril~~kF~ 263 (264)
|++++|+|++.... +++.++.||+ ++.++++|.|++++ .++++++..+++||++ |++||.
T Consensus 236 ~~~~~i~i~v~~~~-~~~~v~~DG~~~~~l~~gd~I~I~~s~-~~~~li~~~~~~f~~~-l~~Kl~ 298 (307)
T 1u0t_A 236 SPEATIAIEIEADG-HDALVFCDGRREMLIPAGSRLEVTRCV-TSVKWARLDSAPFTDR-LVRKFR 298 (307)
T ss_dssp CTTCCEEEEECTTS-CCEEEEETTTEEEEECTTCEEEEEECS-SCEEEEECSCCCHHHH-HHHHHT
T ss_pred CCCCEEEEEEECCC-CCEEEEEECCCCEEECCCCEEEEEECC-CEEEEEEECCCCHHHH-HHHHCC
T ss_conf 89977999991499-878999989925772899699999889-8899999599898999-999759