HHsearch results for GI: 254780754 and protein with PDBid: 1v4v_A
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=96.48 E-value=0.031 Score=32.88 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=52.6
Q ss_pred CCCCCEEEEEEECCCHHHHH---HHHHHHHH--C---------------------CCC------------C---------
Q ss_conf 98765059999559989999---99999987--0---------------------788------------8---------
Q gi|254780754|r 1 MDRNIQKIHFKASNAKKAQE---AYDKFVKI--Y---------------------GNS------------T--------- 33 (264)
Q Consensus 1 m~~~~~ki~i~~~~~~~a~~---~~~~l~~~--~---------------------~~~------------~--------- 33 (264)
|+.+||||.++.-..++..+ +.+.+.+. + +-. .
T Consensus 1 ~~~~MkkI~~v~GtR~e~~k~~pl~~~l~~~~~~~~~li~tG~H~~~~~~~~~~~gi~~d~~~~~~~~~~~~~~~~~~~~ 80 (376)
T 1v4v_A 1 MEGGMKRVVLAFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARIL 80 (376)
T ss_dssp ---CCEEEEEEECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHH
T ss_pred CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999889999970184999999999997289998899982688566747113409976656788888888999999999
Q ss_pred --------HHHCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf --------4557799998795489999999741287299415343320
Q gi|254780754|r 34 --------SEEADVIVVLGGDGFMLQSFHQSKEYDKPIYGMNCGSVGF 73 (264)
Q Consensus 34 --------~~~~Dlii~iGGDGT~L~a~~~~~~~~~PilGIn~G~lGF 73 (264)
-.+||+|+++|...+.|-++-.+...++|+.-|..|-+.+
T Consensus 81 ~~~~~il~~~kpD~Vlv~GDr~~~la~a~aa~~~~ipi~HiegG~rsg 128 (376)
T 1v4v_A 81 PQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSG 128 (376)
T ss_dssp HHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCS
T ss_pred HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 999999740599989996897079999999986297479866176666