HHSEARCH alignment of GI: 254780754 and SCOP domain: d2qv7a1

Alignment
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=97.90  E-value=0.00051  Score=42.59  Aligned_cols=224  Identities=14%  Similarity=0.097  Sum_probs=99.8

Q ss_pred             EEEEEEECCCH---HHHHHHHHHHHHCC-----------CC-----------CHHHCCEEEEECCCHHHHHHHHHHHHCC
Q ss_conf             05999955998---99999999998707-----------88-----------8455779999879548999999974128
Q gi|254780754|r    6 QKIHFKASNAK---KAQEAYDKFVKIYG-----------NS-----------TSEEADVIVVLGGDGFMLQSFHQSKEYD   60 (264)
Q Consensus         6 ~ki~i~~~~~~---~a~~~~~~l~~~~~-----------~~-----------~~~~~Dlii~iGGDGT~L~a~~~~~~~~   60 (264)
                      ||+.++.|+.-   ++.+...++.+.+.           +.           ..+.+|+||+.|||||+-.++..+...+
T Consensus         3 kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~d~ivv~GGDGTv~~v~~~l~~~~   82 (312)
T d2qv7a1           3 KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKP   82 (312)
T ss_dssp             EEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHHHHHHHHHTTCS
T ss_pred             CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHC
T ss_conf             16999987688997579999999999997799289998289227999999887769988999867847999999997535


Q ss_pred             --CEEEEECCCCCCCCCCCCC-HHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEE--------EEEE------E
Q ss_conf             --7299415343320104458-789998664201243203443454212444420157753--------4799------7
Q gi|254780754|r   61 --KPIYGMNCGSVGFLMNEYC-IENLVERLSVAVECTFHPLKMTVFDYDNSICAENILAIN--------EVSI------I  123 (264)
Q Consensus        61 --~PilGIn~G~lGFL~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~AlN--------Ei~i------~  123 (264)
                        +|+.=|-.|+-.-++-.+. +.++.++++....+...+..  +...++.      +.+|        +++-      .
T Consensus        83 ~~~~l~iiP~GTgN~~ar~l~~~~~~~~al~~~~~~~~~~id--~~~v~~~------~f~~~~~~G~~a~~~~~~~~~~~  154 (312)
T d2qv7a1          83 NRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVD--IGKMNNR------YFINLAAGGQLTQVSYETPSKLK  154 (312)
T ss_dssp             SCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHHTCEEEEE--EEEETTE------EESSEEEEECBCC----------
T ss_pred             CCCCEEEEECCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEC--CCCCCCC------CEEEEEEEEHHHHHHHHHHHHHH
T ss_conf             566368753688875044224661499999755139818966--4346764------15556112022377899877632


Q ss_pred             EC----------CCCCCEEEEEEEEEEECCEEEEEEEECCEEEEECCCCHHHHHHHCCCEEEEECCC----EEEEE---C
Q ss_conf             26----------8764236788898766787653121035079822665044675229817740886----05863---0
Q gi|254780754|r  124 RK----------PGQNQLVQAAKLEVKVDDQVRLPELVCDGLVVSTPIGSTAYNFSALGPILPLESR----HLLLT---P  186 (264)
Q Consensus       124 r~----------~~~~~~~~~~~~~v~id~~~~~~~~~~DGvivSTptGSTAY~lSaGGpIv~p~~~----~~~it---p  186 (264)
                      +.          -......+...+.+.+|++. +   .++.+.++-..+.    +-.||.-+.|...    .+.++   +
T Consensus       155 ~~~~~~~y~~~~~~~l~~~~~~~~~i~~dg~~-~---~~~~~~~~v~n~~----~~ggg~~i~p~a~~~DG~l~v~~~~~  226 (312)
T d2qv7a1         155 SIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNV-F---QGEALLFFLGLTN----SMAGFEKLVPDAKLDDGYFTLIIVEK  226 (312)
T ss_dssp             ---CGGGSCCCTTTTGGGBCCEEEEEEETTEE-E---EEEEEEEEEESSC----CCSSCSCSSTTCCSSSSCEEEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC-E---ECCEEEEEEECCC----CCCCCCCCCCCCCCCCCCCEEEEECC
T ss_conf             03310588999999864048647885047763-1---3012553343153----04789744875555668615999738


Q ss_pred             CCCCCHHH-----HHHCCCCC-------CCEEEEEECCCCCCEEEEEECCEECCCCCEEEEEECCCCCEEEEECCCC
Q ss_conf             35433011-----11002788-------4148999748788758999889881487789999879951899964888
Q gi|254780754|r  187 VSPFKPRR-----WHGAILPN-------DVMIEIQVLEHKQRPVIATADRLAIEPVSRINVTQSSDITMRILSDSHR  251 (264)
Q Consensus       187 I~p~~l~~-----~rplVl~~-------~~~I~i~i~~~~~~~~~~~~D~~~~~~~~~i~I~~s~~~~~~li~~~~~  251 (264)
                      .+...+..     ++.-.+..       .++++|+.    ..+..+..||..+... .++|+..+ ..++++.+++-
T Consensus       227 ~~~~~l~~~~~~~~~G~~~~~~~v~~~~~~~i~I~~----~~~~~~~iDGE~~~~~-p~~i~v~p-~al~vlvP~~~  297 (312)
T d2qv7a1         227 SNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISS----FTDLQLNVDGEYGGKL-PANFLNLE-RHIDVFAPNDI  297 (312)
T ss_dssp             CCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEEC----SSCCEEEETTEEEEES-CEEEEEEE-EEEEEECCTTS
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEEE----CCCCEEEECCCCCCCC-CEEEEEEC-CEEEEECCCCC
T ss_conf             999999999999866996789988999918899996----9999799747888897-65999999-98999888987


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]